Gene : Sobic.004G352500 S. bicolor v3.1.1
Defline:  (1 of 2) K02151 - V-type H+-transporting ATPase subunit F (ATPeV1F, ATP6S14) Genomic Order:  3705
Name:  ? Sobic.004G352500 Secondary Identifier:  ? PAC:37931551
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7219 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.004G352500 0.5kb upstream 0.5kb upstream 4752 true Chr04: 68101398-68106149 Sorghum bicolor
Sobic.004G352500 0.5kb upstream 0.5kb upstream 500 false Chr04: 68101398-68101897 Sorghum bicolor
Sobic.004G352500 0.5kb downstream 0.5kb downstream 4752 true Chr04: 68101898-68106649 Sorghum bicolor
Sobic.004G352500 0.5kb downstream 0.5kb downstream 500 false Chr04: 68106150-68106649 Sorghum bicolor
Sobic.004G352500 1.0kb upstream 1.0kb upstream 5252 true Chr04: 68100898-68106149 Sorghum bicolor
Sobic.004G352500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 68100898-68101897 Sorghum bicolor
Sobic.004G352500 1.0kb downstream 1.0kb downstream 5252 true Chr04: 68101898-68107149 Sorghum bicolor
Sobic.004G352500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 68106150-68107149 Sorghum bicolor
Sobic.004G352500 2.0kb upstream 2.0kb upstream 6252 true Chr04: 68099898-68106149 Sorghum bicolor
Sobic.004G352500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 68099898-68101897 Sorghum bicolor
Sobic.004G352500 2.0kb downstream 2.0kb downstream 6252 true Chr04: 68101898-68108149 Sorghum bicolor
Sobic.004G352500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 68106150-68108149 Sorghum bicolor
Sobic.004G352500 5.0kb upstream 5.0kb upstream 9252 true Chr04: 68096898-68106149 Sorghum bicolor
Sobic.004G352500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 68096898-68101897 Sorghum bicolor
Sobic.004G352500 5.0kb downstream 5.0kb downstream 9252 true Chr04: 68101898-68111149 Sorghum bicolor
Sobic.004G352500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 68106150-68111149 Sorghum bicolor
Sobic.004G352500 10.0kb upstream 10.0kb upstream 14252 true Chr04: 68091898-68106149 Sorghum bicolor
Sobic.004G352500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 68091898-68101897 Sorghum bicolor
Sobic.004G352500 10.0kb downstream 10.0kb downstream 14252 true Chr04: 68101898-68116149 Sorghum bicolor
Sobic.004G352500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 68106150-68116149 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191909 5267 Panicoideae View MSA
124583710 5269 Grass View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.66     High  
cufflinks 13.429     High  
cufflinks 19.232     High High
cufflinks 12.551     High  
cufflinks 6.303        
cufflinks 5.428       Low
cufflinks 15.314     High High
cufflinks 12.338     High  
cufflinks 4.748       Low
cufflinks 4.995       Low
cufflinks 10.03        
cufflinks 7.994        
cufflinks 6.051        
cufflinks 10.809        
cufflinks 13.157     High  
cufflinks 16.121     High High
cufflinks 17.113     High High
cufflinks 18.473     High High
cufflinks 7.36        
cufflinks 16.846     High High
cufflinks 4.434       Low
cufflinks 15.663     High High
cufflinks 11.425     High  
cufflinks 11.387     High  
cufflinks 10.925     High  
cufflinks 10.772     High  
cufflinks 6.674        
cufflinks 3.239       Low
cufflinks 14.39     High  
cufflinks 10.307        

0 Strain