Gene : Sobic.009G259200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11349//PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE // NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  2670
Name:  ? Sobic.009G259200 Secondary Identifier:  ? PAC:37919006
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Sequence Feature Displayer

Ontology Annotation Displayer

18 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY0-162 Sorghum bicolor pathologic  
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7176 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7196 Sorghum bicolor pathologic  
Sbicolor PWY-7197 Sorghum bicolor pathologic  
Sbicolor PWY-7200 Sorghum bicolor pathologic  
Sbicolor PWY-7205 Sorghum bicolor pathologic  
Sbicolor PWY-7208 Sorghum bicolor pathologic  
Sbicolor PWY-7210 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  
Sbicolor PWY-7221 Sorghum bicolor pathologic  
Sbicolor PWY-7224 Sorghum bicolor pathologic  
Sbicolor PWY-7226 Sorghum bicolor pathologic  
Sbicolor PWY-7227 Sorghum bicolor pathologic  
Sbicolor PWY-7228 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.009G259200 0.5kb upstream 0.5kb upstream 5461 true Chr09: 59268214-59273674 Sorghum bicolor
Sobic.009G259200 0.5kb upstream 0.5kb upstream 500 false Chr09: 59273175-59273674 Sorghum bicolor
Sobic.009G259200 0.5kb downstream 0.5kb downstream 5461 true Chr09: 59267714-59273174 Sorghum bicolor
Sobic.009G259200 0.5kb downstream 0.5kb downstream 500 false Chr09: 59267714-59268213 Sorghum bicolor
Sobic.009G259200 1.0kb upstream 1.0kb upstream 5961 true Chr09: 59268214-59274174 Sorghum bicolor
Sobic.009G259200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 59273175-59274174 Sorghum bicolor
Sobic.009G259200 1.0kb downstream 1.0kb downstream 5961 true Chr09: 59267214-59273174 Sorghum bicolor
Sobic.009G259200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 59267214-59268213 Sorghum bicolor
Sobic.009G259200 2.0kb upstream 2.0kb upstream 6961 true Chr09: 59268214-59275174 Sorghum bicolor
Sobic.009G259200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 59273175-59275174 Sorghum bicolor
Sobic.009G259200 2.0kb downstream 2.0kb downstream 6961 true Chr09: 59266214-59273174 Sorghum bicolor
Sobic.009G259200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 59266214-59268213 Sorghum bicolor
Sobic.009G259200 5.0kb upstream 5.0kb upstream 9961 true Chr09: 59268214-59278174 Sorghum bicolor
Sobic.009G259200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 59273175-59278174 Sorghum bicolor
Sobic.009G259200 5.0kb downstream 5.0kb downstream 9961 true Chr09: 59263214-59273174 Sorghum bicolor
Sobic.009G259200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 59263214-59268213 Sorghum bicolor
Sobic.009G259200 10.0kb upstream 10.0kb upstream 14961 true Chr09: 59268214-59283174 Sorghum bicolor
Sobic.009G259200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 59273175-59283174 Sorghum bicolor
Sobic.009G259200 10.0kb downstream 10.0kb downstream 14961 true Chr09: 59258214-59273174 Sorghum bicolor
Sobic.009G259200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 59258214-59268213 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178448 5267 Panicoideae View MSA
124571614 5269 Grass View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 49.9     High High
cufflinks 15.226     High  
cufflinks 8.701       Low
cufflinks 12.292     High  
cufflinks 11.677        
cufflinks 15.929     High  
cufflinks 15.033     High  
cufflinks 24.858     High  
cufflinks 7.041       Low
cufflinks 9.455       Low
cufflinks 26.25     High  
cufflinks 19.555     High  
cufflinks 11.352        
cufflinks 27.66     High  
cufflinks 25.042     High  
cufflinks 10.002     High  
cufflinks 16.447     High  
cufflinks 15.808     High  
cufflinks 10.588        
cufflinks 12.473     High  
cufflinks 7.348       Low
cufflinks 66.229     High High
cufflinks 36.572     High High
cufflinks 38.155     High High
cufflinks 7.851       Low
cufflinks 18.041     High  
cufflinks 7.398       Low
cufflinks 8.457       Low
cufflinks 16.884     High  
cufflinks 16.893     High  

0 Strain