Gene : Sobic.010G030700 S. bicolor v3.1.1
Defline:  (1 of 1) K03426 - NAD+ diphosphatase (E3.6.1.22, NUDT12, nudC) Genomic Order:  309
Name:  ? Sobic.010G030700 Secondary Identifier:  ? PAC:37912206
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-5381 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G030700 0.5kb upstream 0.5kb upstream 3677   true Chr10: 2487191-2490867 Sorghum bicolor
Sobic.010G030700 0.5kb upstream 0.5kb upstream 500   false Chr10: 2490368-2490867 Sorghum bicolor
Sobic.010G030700 0.5kb downstream 0.5kb downstream 3677   true Chr10: 2486691-2490367 Sorghum bicolor
Sobic.010G030700 0.5kb downstream 0.5kb downstream 500   false Chr10: 2486691-2487190 Sorghum bicolor
Sobic.010G030700 1.0kb upstream 1.0kb upstream 4177   true Chr10: 2487191-2491367 Sorghum bicolor
Sobic.010G030700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 2490368-2491367 Sorghum bicolor
Sobic.010G030700 1.0kb downstream 1.0kb downstream 4177   true Chr10: 2486191-2490367 Sorghum bicolor
Sobic.010G030700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 2486191-2487190 Sorghum bicolor
Sobic.010G030700 2.0kb upstream 2.0kb upstream 5177   true Chr10: 2487191-2492367 Sorghum bicolor
Sobic.010G030700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 2490368-2492367 Sorghum bicolor
Sobic.010G030700 2.0kb downstream 2.0kb downstream 5177   true Chr10: 2485191-2490367 Sorghum bicolor
Sobic.010G030700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 2485191-2487190 Sorghum bicolor
Sobic.010G030700 5.0kb upstream 5.0kb upstream 8177   true Chr10: 2487191-2495367 Sorghum bicolor
Sobic.010G030700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 2490368-2495367 Sorghum bicolor
Sobic.010G030700 5.0kb downstream 5.0kb downstream 8177   true Chr10: 2482191-2490367 Sorghum bicolor
Sobic.010G030700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 2482191-2487190 Sorghum bicolor
Sobic.010G030700 10.0kb upstream 10.0kb upstream 13177   true Chr10: 2487191-2500367 Sorghum bicolor
Sobic.010G030700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 2490368-2500367 Sorghum bicolor
Sobic.010G030700 10.0kb downstream 10.0kb downstream 13177   true Chr10: 2477191-2490367 Sorghum bicolor
Sobic.010G030700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 2477191-2487190 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175183 5267 Panicoideae View MSA
124569512 5269 Grass View MSA
122041659 5273 Angiosperm View MSA
121345450 5274 Embryophyte View MSA
123427123 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.041       High
cufflinks 2.61       Low
cufflinks 5.019        
cufflinks 7.405        
cufflinks 4.231       Low
cufflinks 9.049        
cufflinks 5.314        
cufflinks 5.869        
cufflinks 6.154        
cufflinks 5.113        
cufflinks 8.452        
cufflinks 10.005       High
cufflinks 8.459        
cufflinks 12.972     High High
cufflinks 6.932        
cufflinks 5.659        
cufflinks 5.416        
cufflinks 5.563        
cufflinks 6.664        
cufflinks 5.261        
cufflinks 3.237       Low
cufflinks 8.172        
cufflinks 10.633       High
cufflinks 10.182       High
cufflinks 2.784       Low
cufflinks 2.607       Low
cufflinks 10.548       High
cufflinks 8.617        
cufflinks 8.33        
cufflinks 5.765        

0 Strain