Gene : Sobic.010G041000 S. bicolor v3.1.1
Defline:  (1 of 1) K04485 - DNA repair protein RadA/Sms (sms, radA) Genomic Order:  413
Name:  ? Sobic.010G041000 Secondary Identifier:  ? PAC:37909924
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G041000 0.5kb upstream 0.5kb upstream 8797   true Chr10: 3193239-3202035 Sorghum bicolor
Sobic.010G041000 0.5kb upstream 0.5kb upstream 500   false Chr10: 3193239-3193738 Sorghum bicolor
Sobic.010G041000 0.5kb downstream 0.5kb downstream 8797   true Chr10: 3193739-3202535 Sorghum bicolor
Sobic.010G041000 0.5kb downstream 0.5kb downstream 500   false Chr10: 3202036-3202535 Sorghum bicolor
Sobic.010G041000 1.0kb upstream 1.0kb upstream 9297   true Chr10: 3192739-3202035 Sorghum bicolor
Sobic.010G041000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 3192739-3193738 Sorghum bicolor
Sobic.010G041000 1.0kb downstream 1.0kb downstream 9297   true Chr10: 3193739-3203035 Sorghum bicolor
Sobic.010G041000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 3202036-3203035 Sorghum bicolor
Sobic.010G041000 2.0kb upstream 2.0kb upstream 10297   true Chr10: 3191739-3202035 Sorghum bicolor
Sobic.010G041000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 3191739-3193738 Sorghum bicolor
Sobic.010G041000 2.0kb downstream 2.0kb downstream 10297   true Chr10: 3193739-3204035 Sorghum bicolor
Sobic.010G041000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 3202036-3204035 Sorghum bicolor
Sobic.010G041000 5.0kb upstream 5.0kb upstream 13297   true Chr10: 3188739-3202035 Sorghum bicolor
Sobic.010G041000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 3188739-3193738 Sorghum bicolor
Sobic.010G041000 5.0kb downstream 5.0kb downstream 13297   true Chr10: 3193739-3207035 Sorghum bicolor
Sobic.010G041000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 3202036-3207035 Sorghum bicolor
Sobic.010G041000 10.0kb upstream 10.0kb upstream 18297   true Chr10: 3183739-3202035 Sorghum bicolor
Sobic.010G041000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 3183739-3193738 Sorghum bicolor
Sobic.010G041000 10.0kb downstream 10.0kb downstream 18297   true Chr10: 3193739-3212035 Sorghum bicolor
Sobic.010G041000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 3202036-3212035 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185167 5267 Panicoideae View MSA
124577422 5269 Grass View MSA
122043621 5273 Angiosperm View MSA
121346798 5274 Embryophyte View MSA
123426216 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.071        
cufflinks 0.168       Low
cufflinks 0.386       Low
cufflinks 0.977        
cufflinks 1.928       High
cufflinks 1.211        
cufflinks 0.873        
cufflinks 0.305       Low
cufflinks 1.634       High
cufflinks 1.944       High
cufflinks 0.734        
cufflinks 1.199        
cufflinks 1.106        
cufflinks 0.629        
cufflinks 1.079        
cufflinks 0.298       Low
cufflinks 0.775        
cufflinks 0.767        
cufflinks 0.403       Low
cufflinks 1.008        
cufflinks 4.045       High
cufflinks 0.638        
cufflinks 0.776        
cufflinks 0.868        
cufflinks 0.349       Low
cufflinks 0.167       Low
cufflinks 0.965        
cufflinks 0.3       Low
cufflinks 0.497        
cufflinks 1.58       High

0 Strain