Gene : Sobic.007G006900 S. bicolor v3.1.1
Defline:  (1 of 1) K14574 - ribosome maturation protein SDO1 (SDO1, SBDS) Genomic Order:  73
Name:  ? Sobic.007G006900 Secondary Identifier:  ? PAC:37934312
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G006900 0.5kb upstream 0.5kb upstream 4142 true Chr07: 592173-596314 Sorghum bicolor
Sobic.007G006900 0.5kb upstream 0.5kb upstream 500 false Chr07: 595815-596314 Sorghum bicolor
Sobic.007G006900 0.5kb downstream 0.5kb downstream 4142 true Chr07: 591673-595814 Sorghum bicolor
Sobic.007G006900 0.5kb downstream 0.5kb downstream 500 false Chr07: 591673-592172 Sorghum bicolor
Sobic.007G006900 1.0kb upstream 1.0kb upstream 4642 true Chr07: 592173-596814 Sorghum bicolor
Sobic.007G006900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 595815-596814 Sorghum bicolor
Sobic.007G006900 1.0kb downstream 1.0kb downstream 4642 true Chr07: 591173-595814 Sorghum bicolor
Sobic.007G006900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 591173-592172 Sorghum bicolor
Sobic.007G006900 2.0kb upstream 2.0kb upstream 5642 true Chr07: 592173-597814 Sorghum bicolor
Sobic.007G006900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 595815-597814 Sorghum bicolor
Sobic.007G006900 2.0kb downstream 2.0kb downstream 5642 true Chr07: 590173-595814 Sorghum bicolor
Sobic.007G006900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 590173-592172 Sorghum bicolor
Sobic.007G006900 5.0kb upstream 5.0kb upstream 8642 true Chr07: 592173-600814 Sorghum bicolor
Sobic.007G006900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 595815-600814 Sorghum bicolor
Sobic.007G006900 5.0kb downstream 5.0kb downstream 8642 true Chr07: 587173-595814 Sorghum bicolor
Sobic.007G006900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 587173-592172 Sorghum bicolor
Sobic.007G006900 10.0kb upstream 10.0kb upstream 13642 true Chr07: 592173-605814 Sorghum bicolor
Sobic.007G006900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 595815-605814 Sorghum bicolor
Sobic.007G006900 10.0kb downstream 10.0kb downstream 13642 true Chr07: 582173-595814 Sorghum bicolor
Sobic.007G006900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 582173-592172 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190596 5267 Panicoideae View MSA
124572402 5269 Grass View MSA
122043852 5273 Angiosperm View MSA
121346736 5274 Embryophyte View MSA
123428704 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.803        
cufflinks 3.51       Low
cufflinks 6.348        
cufflinks 11.239        
cufflinks 5.599        
cufflinks 11.247        
cufflinks 9.259        
cufflinks 5.305       Low
cufflinks 17.009     High High
cufflinks 14.457     High High
cufflinks 5.824        
cufflinks 8.856        
cufflinks 9.907        
cufflinks 8.991        
cufflinks 8.738        
cufflinks 6.543        
cufflinks 10.485        
cufflinks 9.116        
cufflinks 6.506        
cufflinks 11.676        
cufflinks 10.982        
cufflinks 7.156        
cufflinks 8.551        
cufflinks 8.794        
cufflinks 5.573       Low
cufflinks 4.806       Low
cufflinks 6.948        
cufflinks 29.746     High High
cufflinks 6.536        
cufflinks 10.611        

0 Strain