Gene : Sobic.007G051800 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11514//PTHR11514:SF33 - MYC // TRANSCRIPTION FACTOR BHLH27-RELATED Genomic Order:  546
Name:  ? Sobic.007G051800 Secondary Identifier:  ? PAC:37934592
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G051800 0.5kb upstream 0.5kb upstream 2588 true Chr07: 5299967-5302554 Sorghum bicolor
Sobic.007G051800 0.5kb upstream 0.5kb upstream 500 false Chr07: 5302055-5302554 Sorghum bicolor
Sobic.007G051800 0.5kb downstream 0.5kb downstream 2588 true Chr07: 5299467-5302054 Sorghum bicolor
Sobic.007G051800 0.5kb downstream 0.5kb downstream 500 false Chr07: 5299467-5299966 Sorghum bicolor
Sobic.007G051800 1.0kb upstream 1.0kb upstream 3088 true Chr07: 5299967-5303054 Sorghum bicolor
Sobic.007G051800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5302055-5303054 Sorghum bicolor
Sobic.007G051800 1.0kb downstream 1.0kb downstream 3088 true Chr07: 5298967-5302054 Sorghum bicolor
Sobic.007G051800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5298967-5299966 Sorghum bicolor
Sobic.007G051800 2.0kb upstream 2.0kb upstream 4088 true Chr07: 5299967-5304054 Sorghum bicolor
Sobic.007G051800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5302055-5304054 Sorghum bicolor
Sobic.007G051800 2.0kb downstream 2.0kb downstream 4088 true Chr07: 5297967-5302054 Sorghum bicolor
Sobic.007G051800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5297967-5299966 Sorghum bicolor
Sobic.007G051800 5.0kb upstream 5.0kb upstream 7088 true Chr07: 5299967-5307054 Sorghum bicolor
Sobic.007G051800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5302055-5307054 Sorghum bicolor
Sobic.007G051800 5.0kb downstream 5.0kb downstream 7088 true Chr07: 5294967-5302054 Sorghum bicolor
Sobic.007G051800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5294967-5299966 Sorghum bicolor
Sobic.007G051800 10.0kb upstream 10.0kb upstream 12088 true Chr07: 5299967-5312054 Sorghum bicolor
Sobic.007G051800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5302055-5312054 Sorghum bicolor
Sobic.007G051800 10.0kb downstream 10.0kb downstream 12088 true Chr07: 5289967-5302054 Sorghum bicolor
Sobic.007G051800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5289967-5299966 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197746 5267 Panicoideae View MSA
124569507 5269 Grass View MSA
122050016 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216       Low
cufflinks 19.413     High  
cufflinks 306.546     High High
cufflinks 219.158     High  
cufflinks 359.507     High High
cufflinks 291.791     High High
cufflinks 0.901       Low
cufflinks 2.545        
cufflinks 19.628     High  
cufflinks 76.245     High  
cufflinks 131.515     High  
cufflinks 2.304        
cufflinks 137.959     High  
cufflinks 0.757       Low
cufflinks 79.14     High  
cufflinks 18.16     High  
cufflinks 0.897       Low
cufflinks 0.348       Low
cufflinks 201.185     High  
cufflinks 2.488        
cufflinks 3.739        
cufflinks 12.813     High  
cufflinks 0.679       Low
cufflinks 0.888       Low
cufflinks 2.137        
cufflinks 2.079        
cufflinks 276.735     High High
cufflinks 1.068       Low
cufflinks 92.515     High  
cufflinks 62.256     High  

0 Strain