Gene : Sobic.007G052400 S. bicolor v3.1.1
Defline:  (1 of 5) PTHR17130 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  552
Name:  ? Sobic.007G052400 Secondary Identifier:  ? PAC:37935681
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G052400 0.5kb upstream 0.5kb upstream 3610 true Chr07: 5357102-5360711 Sorghum bicolor
Sobic.007G052400 0.5kb upstream 0.5kb upstream 500 false Chr07: 5357102-5357601 Sorghum bicolor
Sobic.007G052400 0.5kb downstream 0.5kb downstream 3610 true Chr07: 5357602-5361211 Sorghum bicolor
Sobic.007G052400 0.5kb downstream 0.5kb downstream 500 false Chr07: 5360712-5361211 Sorghum bicolor
Sobic.007G052400 1.0kb upstream 1.0kb upstream 4110 true Chr07: 5356602-5360711 Sorghum bicolor
Sobic.007G052400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 5356602-5357601 Sorghum bicolor
Sobic.007G052400 1.0kb downstream 1.0kb downstream 4110 true Chr07: 5357602-5361711 Sorghum bicolor
Sobic.007G052400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 5360712-5361711 Sorghum bicolor
Sobic.007G052400 2.0kb upstream 2.0kb upstream 5110 true Chr07: 5355602-5360711 Sorghum bicolor
Sobic.007G052400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 5355602-5357601 Sorghum bicolor
Sobic.007G052400 2.0kb downstream 2.0kb downstream 5110 true Chr07: 5357602-5362711 Sorghum bicolor
Sobic.007G052400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 5360712-5362711 Sorghum bicolor
Sobic.007G052400 5.0kb upstream 5.0kb upstream 8110 true Chr07: 5352602-5360711 Sorghum bicolor
Sobic.007G052400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 5352602-5357601 Sorghum bicolor
Sobic.007G052400 5.0kb downstream 5.0kb downstream 8110 true Chr07: 5357602-5365711 Sorghum bicolor
Sobic.007G052400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 5360712-5365711 Sorghum bicolor
Sobic.007G052400 10.0kb upstream 10.0kb upstream 13110 true Chr07: 5347602-5360711 Sorghum bicolor
Sobic.007G052400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 5347602-5357601 Sorghum bicolor
Sobic.007G052400 10.0kb downstream 10.0kb downstream 13110 true Chr07: 5357602-5370711 Sorghum bicolor
Sobic.007G052400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 5360712-5370711 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181231 5267 Panicoideae View MSA
124569941 5269 Grass View MSA
122043639 5273 Angiosperm View MSA
121349762 5274 Embryophyte View MSA
123424471 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.82        
cufflinks 126.685     High High
cufflinks 53.158     High High
cufflinks 18.516     High  
cufflinks 1.187        
cufflinks 12.659        
cufflinks 34.913     High High
cufflinks 61.49     High High
cufflinks 1.245        
cufflinks 1.2        
cufflinks 0.332       Low
cufflinks 0.325       Low
cufflinks 1.19        
cufflinks 0.271       Low
cufflinks 9.95        
cufflinks 98.831     High High
cufflinks 32.397     High High
cufflinks 37.801     High High
cufflinks 36.315     High High
cufflinks 21.23     High  
cufflinks 0.761        
cufflinks 0.211       Low
cufflinks 0.194       Low
cufflinks 0.273       Low
cufflinks 41.499     High High
cufflinks 94.313     High High
cufflinks 0.378        
cufflinks 1.538        
cufflinks 27.311     High High
cufflinks 5.594        

0 Strain