Gene : Sobic.007G069400 S. bicolor v3.1.1
Defline:  (1 of 164) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  721
Name:  ? Sobic.007G069400 Secondary Identifier:  ? PAC:37935556
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G069400 0.5kb upstream 0.5kb upstream 5377 true Chr07: 7710290-7715666 Sorghum bicolor
Sobic.007G069400 0.5kb upstream 0.5kb upstream 500 false Chr07: 7710290-7710789 Sorghum bicolor
Sobic.007G069400 0.5kb downstream 0.5kb downstream 5377 true Chr07: 7710790-7716166 Sorghum bicolor
Sobic.007G069400 0.5kb downstream 0.5kb downstream 500 false Chr07: 7715667-7716166 Sorghum bicolor
Sobic.007G069400 1.0kb upstream 1.0kb upstream 5877 true Chr07: 7709790-7715666 Sorghum bicolor
Sobic.007G069400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 7709790-7710789 Sorghum bicolor
Sobic.007G069400 1.0kb downstream 1.0kb downstream 5877 true Chr07: 7710790-7716666 Sorghum bicolor
Sobic.007G069400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 7715667-7716666 Sorghum bicolor
Sobic.007G069400 2.0kb upstream 2.0kb upstream 6877 true Chr07: 7708790-7715666 Sorghum bicolor
Sobic.007G069400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 7708790-7710789 Sorghum bicolor
Sobic.007G069400 2.0kb downstream 2.0kb downstream 6877 true Chr07: 7710790-7717666 Sorghum bicolor
Sobic.007G069400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 7715667-7717666 Sorghum bicolor
Sobic.007G069400 5.0kb upstream 5.0kb upstream 9877 true Chr07: 7705790-7715666 Sorghum bicolor
Sobic.007G069400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 7705790-7710789 Sorghum bicolor
Sobic.007G069400 5.0kb downstream 5.0kb downstream 9877 true Chr07: 7710790-7720666 Sorghum bicolor
Sobic.007G069400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 7715667-7720666 Sorghum bicolor
Sobic.007G069400 10.0kb upstream 10.0kb upstream 14877 true Chr07: 7700790-7715666 Sorghum bicolor
Sobic.007G069400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 7700790-7710789 Sorghum bicolor
Sobic.007G069400 10.0kb downstream 10.0kb downstream 14877 true Chr07: 7710790-7725666 Sorghum bicolor
Sobic.007G069400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 7715667-7725666 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180824 5267 Panicoideae View MSA
124572611 5269 Grass View MSA
122045308 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346704 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.845       Low
cufflinks 1.07       Low
cufflinks 7.378        
cufflinks 7.19        
cufflinks 8.149        
cufflinks 4.625        
cufflinks 9.198       High
cufflinks 6.718        
cufflinks 3.925        
cufflinks 3.942        
cufflinks 2.996        
cufflinks 2.701        
cufflinks 2.178        
cufflinks 2.315        
cufflinks 5.28        
cufflinks 5.133        
cufflinks 8.472       High
cufflinks 12.954     High High
cufflinks 8.013        
cufflinks 5.167        
cufflinks 12.319       High
cufflinks 2.351        
cufflinks 2.172        
cufflinks 2.378        
cufflinks 2.103        
cufflinks 1.36       Low
cufflinks 2.575        
cufflinks 3.334        
cufflinks 22.691     High High
cufflinks 6.065        

0 Strain