Gene : Sobic.007G065400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR15921:SF4 - PCF11P-SIMILAR PROTEIN 4 Genomic Order:  675
Name:  ? Sobic.007G065400 Secondary Identifier:  ? PAC:37934854
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G065400 0.5kb upstream 0.5kb upstream 9534 true Chr07: 6937950-6947483 Sorghum bicolor
Sobic.007G065400 0.5kb upstream 0.5kb upstream 500 false Chr07: 6946984-6947483 Sorghum bicolor
Sobic.007G065400 0.5kb downstream 0.5kb downstream 9534 true Chr07: 6937450-6946983 Sorghum bicolor
Sobic.007G065400 0.5kb downstream 0.5kb downstream 500 false Chr07: 6937450-6937949 Sorghum bicolor
Sobic.007G065400 1.0kb upstream 1.0kb upstream 10034 true Chr07: 6937950-6947983 Sorghum bicolor
Sobic.007G065400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 6946984-6947983 Sorghum bicolor
Sobic.007G065400 1.0kb downstream 1.0kb downstream 10034 true Chr07: 6936950-6946983 Sorghum bicolor
Sobic.007G065400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 6936950-6937949 Sorghum bicolor
Sobic.007G065400 2.0kb upstream 2.0kb upstream 11034 true Chr07: 6937950-6948983 Sorghum bicolor
Sobic.007G065400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 6946984-6948983 Sorghum bicolor
Sobic.007G065400 2.0kb downstream 2.0kb downstream 11034 true Chr07: 6935950-6946983 Sorghum bicolor
Sobic.007G065400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 6935950-6937949 Sorghum bicolor
Sobic.007G065400 5.0kb upstream 5.0kb upstream 14034 true Chr07: 6937950-6951983 Sorghum bicolor
Sobic.007G065400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 6946984-6951983 Sorghum bicolor
Sobic.007G065400 5.0kb downstream 5.0kb downstream 14034 true Chr07: 6932950-6946983 Sorghum bicolor
Sobic.007G065400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 6932950-6937949 Sorghum bicolor
Sobic.007G065400 10.0kb upstream 10.0kb upstream 19034 true Chr07: 6937950-6956983 Sorghum bicolor
Sobic.007G065400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 6946984-6956983 Sorghum bicolor
Sobic.007G065400 10.0kb downstream 10.0kb downstream 19034 true Chr07: 6927950-6946983 Sorghum bicolor
Sobic.007G065400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 6927950-6937949 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178391 5267 Panicoideae View MSA
124578937 5269 Grass View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.516        
cufflinks 2.018        
cufflinks 1.821        
cufflinks 1.978        
cufflinks 3.579       High
cufflinks 3.191        
cufflinks 2.244        
cufflinks 1.635       Low
cufflinks 3.866       High
cufflinks 4.071       High
cufflinks 2.294        
cufflinks 2.933        
cufflinks 3.244        
cufflinks 1.848        
cufflinks 3.075        
cufflinks 2.355        
cufflinks 2.047        
cufflinks 2.041        
cufflinks 4.537       High
cufflinks 2.441        
cufflinks 5.939       High
cufflinks 2.073        
cufflinks 1.948        
cufflinks 2.05        
cufflinks 3.253        
cufflinks 2.107        
cufflinks 2.466        
cufflinks 1.736       Low
cufflinks 1.863        
cufflinks 3.397        

0 Strain