Gene : Sobic.007G117500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10050//PTHR10050:SF33 - DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE // SUBFAMILY NOT NAMED Genomic Order:  1233
Name:  ? Sobic.007G117500 Secondary Identifier:  ? PAC:37934707
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G117500 0.5kb upstream 0.5kb upstream 3557 true Chr07: 50981135-50984691 Sorghum bicolor
Sobic.007G117500 0.5kb upstream 0.5kb upstream 500 false Chr07: 50981135-50981634 Sorghum bicolor
Sobic.007G117500 0.5kb downstream 0.5kb downstream 3557 true Chr07: 50981635-50985191 Sorghum bicolor
Sobic.007G117500 0.5kb downstream 0.5kb downstream 500 false Chr07: 50984692-50985191 Sorghum bicolor
Sobic.007G117500 1.0kb upstream 1.0kb upstream 4057 true Chr07: 50980635-50984691 Sorghum bicolor
Sobic.007G117500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50980635-50981634 Sorghum bicolor
Sobic.007G117500 1.0kb downstream 1.0kb downstream 4057 true Chr07: 50981635-50985691 Sorghum bicolor
Sobic.007G117500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50984692-50985691 Sorghum bicolor
Sobic.007G117500 2.0kb upstream 2.0kb upstream 5057 true Chr07: 50979635-50984691 Sorghum bicolor
Sobic.007G117500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50979635-50981634 Sorghum bicolor
Sobic.007G117500 2.0kb downstream 2.0kb downstream 5057 true Chr07: 50981635-50986691 Sorghum bicolor
Sobic.007G117500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50984692-50986691 Sorghum bicolor
Sobic.007G117500 5.0kb upstream 5.0kb upstream 8057 true Chr07: 50976635-50984691 Sorghum bicolor
Sobic.007G117500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50976635-50981634 Sorghum bicolor
Sobic.007G117500 5.0kb downstream 5.0kb downstream 8057 true Chr07: 50981635-50989691 Sorghum bicolor
Sobic.007G117500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50984692-50989691 Sorghum bicolor
Sobic.007G117500 10.0kb upstream 10.0kb upstream 13057 true Chr07: 50971635-50984691 Sorghum bicolor
Sobic.007G117500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50971635-50981634 Sorghum bicolor
Sobic.007G117500 10.0kb downstream 10.0kb downstream 13057 true Chr07: 50981635-50994691 Sorghum bicolor
Sobic.007G117500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50984692-50994691 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181961 5267 Panicoideae View MSA
124571144 5269 Grass View MSA
122043043 5273 Angiosperm View MSA
121348450 5274 Embryophyte View MSA
123428555 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.109       High
cufflinks 0.999       Low
cufflinks 3.121        
cufflinks 10.613       High
cufflinks 4.458        
cufflinks 2.929        
cufflinks 2.302        
cufflinks 1.859       Low
cufflinks 4.03        
cufflinks 4.402        
cufflinks 3.237        
cufflinks 2.537        
cufflinks 2.944        
cufflinks 3.401        
cufflinks 2.465        
cufflinks 2.566        
cufflinks 2.823        
cufflinks 2.81        
cufflinks 1.949       Low
cufflinks 3.582        
cufflinks 4.921        
cufflinks 3.296        
cufflinks 2.809        
cufflinks 2.748        
cufflinks 2.586        
cufflinks 1.596       Low
cufflinks 3.519        
cufflinks 8.512       High
cufflinks 2.997        
cufflinks 2.74        

0 Strain