Gene : Sobic.007G098800 S. bicolor v3.1.1
Defline:  (1 of 2) 3.2.2.23 - DNA-formamidopyrimidine glycosylase / Formamidopyrimidine-DNA glycosylase Genomic Order:  1039
Name:  ? Sobic.007G098800 Secondary Identifier:  ? PAC:37935745
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G098800 0.5kb upstream 0.5kb upstream 24621 true Chr07: 20594140-20618760 Sorghum bicolor
Sobic.007G098800 0.5kb upstream 0.5kb upstream 500 false Chr07: 20594140-20594639 Sorghum bicolor
Sobic.007G098800 0.5kb downstream 0.5kb downstream 24621 true Chr07: 20594640-20619260 Sorghum bicolor
Sobic.007G098800 0.5kb downstream 0.5kb downstream 500 false Chr07: 20618761-20619260 Sorghum bicolor
Sobic.007G098800 1.0kb upstream 1.0kb upstream 25121 true Chr07: 20593640-20618760 Sorghum bicolor
Sobic.007G098800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 20593640-20594639 Sorghum bicolor
Sobic.007G098800 1.0kb downstream 1.0kb downstream 25121 true Chr07: 20594640-20619760 Sorghum bicolor
Sobic.007G098800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 20618761-20619760 Sorghum bicolor
Sobic.007G098800 2.0kb upstream 2.0kb upstream 26121 true Chr07: 20592640-20618760 Sorghum bicolor
Sobic.007G098800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 20592640-20594639 Sorghum bicolor
Sobic.007G098800 2.0kb downstream 2.0kb downstream 26121 true Chr07: 20594640-20620760 Sorghum bicolor
Sobic.007G098800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 20618761-20620760 Sorghum bicolor
Sobic.007G098800 5.0kb upstream 5.0kb upstream 29121 true Chr07: 20589640-20618760 Sorghum bicolor
Sobic.007G098800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 20589640-20594639 Sorghum bicolor
Sobic.007G098800 5.0kb downstream 5.0kb downstream 29121 true Chr07: 20594640-20623760 Sorghum bicolor
Sobic.007G098800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 20618761-20623760 Sorghum bicolor
Sobic.007G098800 10.0kb upstream 10.0kb upstream 34121 true Chr07: 20584640-20618760 Sorghum bicolor
Sobic.007G098800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 20584640-20594639 Sorghum bicolor
Sobic.007G098800 10.0kb downstream 10.0kb downstream 34121 true Chr07: 20594640-20628760 Sorghum bicolor
Sobic.007G098800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 20618761-20628760 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183260 5267 Panicoideae View MSA
124569340 5269 Grass View MSA
122048986 5273 Angiosperm View MSA
121348452 5274 Embryophyte View MSA
123427632 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.083     Low Low
cufflinks 0.052       Low
cufflinks 0.095       Low
cufflinks 0.058     Low Low
cufflinks 0.47       High
cufflinks 0.089     Low Low
cufflinks 0.254        
cufflinks 0.146        
cufflinks 0.165        
cufflinks 0.175        
cufflinks 0.212        
cufflinks 0.22        
cufflinks 0.17        
cufflinks 0.159        
cufflinks 0.367        
cufflinks 0.07     Low Low
cufflinks 0.256        
cufflinks 0.29        
cufflinks 0.179        
cufflinks 0.253        
cufflinks 1.233       High
cufflinks 0.218        
cufflinks 0.247        
cufflinks 0.22        
cufflinks 0.079       Low
cufflinks 0.066       Low
cufflinks 0.14        
cufflinks 0.171        
cufflinks 0.21        
cufflinks 0.441       High

0 Strain