Gene : Sobic.007G090472 S. bicolor v3.1.1
Defline:  (1 of 7) PTHR11764//PTHR11764:SF14 - LANOSTEROL SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  958
Name:  ? Sobic.007G090472 Secondary Identifier:  ? PAC:37934975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2541 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G090472 0.5kb upstream 0.5kb upstream 37376 true Chr07: 14128051-14165426 Sorghum bicolor
Sobic.007G090472 0.5kb upstream 0.5kb upstream 500 false Chr07: 14128051-14128550 Sorghum bicolor
Sobic.007G090472 0.5kb downstream 0.5kb downstream 37376 true Chr07: 14128551-14165926 Sorghum bicolor
Sobic.007G090472 0.5kb downstream 0.5kb downstream 500 false Chr07: 14165427-14165926 Sorghum bicolor
Sobic.007G090472 1.0kb upstream 1.0kb upstream 37876 true Chr07: 14127551-14165426 Sorghum bicolor
Sobic.007G090472 1.0kb upstream 1.0kb upstream 1000 false Chr07: 14127551-14128550 Sorghum bicolor
Sobic.007G090472 1.0kb downstream 1.0kb downstream 37876 true Chr07: 14128551-14166426 Sorghum bicolor
Sobic.007G090472 1.0kb downstream 1.0kb downstream 1000 false Chr07: 14165427-14166426 Sorghum bicolor
Sobic.007G090472 2.0kb upstream 2.0kb upstream 38876 true Chr07: 14126551-14165426 Sorghum bicolor
Sobic.007G090472 2.0kb upstream 2.0kb upstream 2000 false Chr07: 14126551-14128550 Sorghum bicolor
Sobic.007G090472 2.0kb downstream 2.0kb downstream 38876 true Chr07: 14128551-14167426 Sorghum bicolor
Sobic.007G090472 2.0kb downstream 2.0kb downstream 2000 false Chr07: 14165427-14167426 Sorghum bicolor
Sobic.007G090472 5.0kb upstream 5.0kb upstream 41876 true Chr07: 14123551-14165426 Sorghum bicolor
Sobic.007G090472 5.0kb upstream 5.0kb upstream 5000 false Chr07: 14123551-14128550 Sorghum bicolor
Sobic.007G090472 5.0kb downstream 5.0kb downstream 41876 true Chr07: 14128551-14170426 Sorghum bicolor
Sobic.007G090472 5.0kb downstream 5.0kb downstream 5000 false Chr07: 14165427-14170426 Sorghum bicolor
Sobic.007G090472 10.0kb upstream 10.0kb upstream 46876 true Chr07: 14118551-14165426 Sorghum bicolor
Sobic.007G090472 10.0kb upstream 10.0kb upstream 10000 false Chr07: 14118551-14128550 Sorghum bicolor
Sobic.007G090472 10.0kb downstream 10.0kb downstream 46876 true Chr07: 14128551-14175426 Sorghum bicolor
Sobic.007G090472 10.0kb downstream 10.0kb downstream 10000 false Chr07: 14165427-14175426 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122192404 5267 Panicoideae View MSA
124584750 5269 Grass View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.109        
cufflinks 0.005     Low  
cufflinks 0.001     Low Low
cufflinks 0.031     Low  
cufflinks 0.059     Low  
cufflinks 0.253       High
cufflinks 0.36       High
cufflinks 0.016     Low  
cufflinks 0.408       High
cufflinks 0.344       High
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.001     Low Low
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104     Low  
cufflinks 0.291       High
cufflinks 0.258       High
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.563       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.613       High

0 Strain