Gene : Sobic.007G145901 S. bicolor v3.1.1
Defline:  (1 of 4) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  1537
Name:  ? Sobic.007G145901 Secondary Identifier:  ? PAC:37934177
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G145901 0.5kb upstream 0.5kb upstream 1094 true Chr07: 57570203-57571296 Sorghum bicolor
Sobic.007G145901 0.5kb upstream 0.5kb upstream 500 false Chr07: 57570203-57570702 Sorghum bicolor
Sobic.007G145901 0.5kb downstream 0.5kb downstream 1094 true Chr07: 57570703-57571796 Sorghum bicolor
Sobic.007G145901 0.5kb downstream 0.5kb downstream 500 false Chr07: 57571297-57571796 Sorghum bicolor
Sobic.007G145901 1.0kb upstream 1.0kb upstream 1594 true Chr07: 57569703-57571296 Sorghum bicolor
Sobic.007G145901 1.0kb upstream 1.0kb upstream 1000 false Chr07: 57569703-57570702 Sorghum bicolor
Sobic.007G145901 1.0kb downstream 1.0kb downstream 1594 true Chr07: 57570703-57572296 Sorghum bicolor
Sobic.007G145901 1.0kb downstream 1.0kb downstream 1000 false Chr07: 57571297-57572296 Sorghum bicolor
Sobic.007G145901 2.0kb upstream 2.0kb upstream 2594 true Chr07: 57568703-57571296 Sorghum bicolor
Sobic.007G145901 2.0kb upstream 2.0kb upstream 2000 false Chr07: 57568703-57570702 Sorghum bicolor
Sobic.007G145901 2.0kb downstream 2.0kb downstream 2594 true Chr07: 57570703-57573296 Sorghum bicolor
Sobic.007G145901 2.0kb downstream 2.0kb downstream 2000 false Chr07: 57571297-57573296 Sorghum bicolor
Sobic.007G145901 5.0kb upstream 5.0kb upstream 5594 true Chr07: 57565703-57571296 Sorghum bicolor
Sobic.007G145901 5.0kb upstream 5.0kb upstream 5000 false Chr07: 57565703-57570702 Sorghum bicolor
Sobic.007G145901 5.0kb downstream 5.0kb downstream 5594 true Chr07: 57570703-57576296 Sorghum bicolor
Sobic.007G145901 5.0kb downstream 5.0kb downstream 5000 false Chr07: 57571297-57576296 Sorghum bicolor
Sobic.007G145901 10.0kb upstream 10.0kb upstream 10594 true Chr07: 57560703-57571296 Sorghum bicolor
Sobic.007G145901 10.0kb upstream 10.0kb upstream 10000 false Chr07: 57560703-57570702 Sorghum bicolor
Sobic.007G145901 10.0kb downstream 10.0kb downstream 10594 true Chr07: 57570703-57581296 Sorghum bicolor
Sobic.007G145901 10.0kb downstream 10.0kb downstream 10000 false Chr07: 57571297-57581296 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197626 5267 Panicoideae View MSA
124467423 5269 Grass View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain