Gene : Sobic.007G159700 S. bicolor v3.1.1
Defline:  (1 of 2) K02138 - F-type H+-transporting ATPase subunit d (ATPeF0D, ATP5H, ATP7) Genomic Order:  1681
Name:  ? Sobic.007G159700 Secondary Identifier:  ? PAC:37935200
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G159700 0.5kb upstream 0.5kb upstream 3569 true Chr07: 59406245-59409813 Sorghum bicolor
Sobic.007G159700 0.5kb upstream 0.5kb upstream 500 false Chr07: 59409314-59409813 Sorghum bicolor
Sobic.007G159700 0.5kb downstream 0.5kb downstream 3569 true Chr07: 59405745-59409313 Sorghum bicolor
Sobic.007G159700 0.5kb downstream 0.5kb downstream 500 false Chr07: 59405745-59406244 Sorghum bicolor
Sobic.007G159700 1.0kb upstream 1.0kb upstream 4069 true Chr07: 59406245-59410313 Sorghum bicolor
Sobic.007G159700 1.0kb upstream 1.0kb upstream 1000 false Chr07: 59409314-59410313 Sorghum bicolor
Sobic.007G159700 1.0kb downstream 1.0kb downstream 4069 true Chr07: 59405245-59409313 Sorghum bicolor
Sobic.007G159700 1.0kb downstream 1.0kb downstream 1000 false Chr07: 59405245-59406244 Sorghum bicolor
Sobic.007G159700 2.0kb upstream 2.0kb upstream 5069 true Chr07: 59406245-59411313 Sorghum bicolor
Sobic.007G159700 2.0kb upstream 2.0kb upstream 2000 false Chr07: 59409314-59411313 Sorghum bicolor
Sobic.007G159700 2.0kb downstream 2.0kb downstream 5069 true Chr07: 59404245-59409313 Sorghum bicolor
Sobic.007G159700 2.0kb downstream 2.0kb downstream 2000 false Chr07: 59404245-59406244 Sorghum bicolor
Sobic.007G159700 5.0kb upstream 5.0kb upstream 8069 true Chr07: 59406245-59414313 Sorghum bicolor
Sobic.007G159700 5.0kb upstream 5.0kb upstream 5000 false Chr07: 59409314-59414313 Sorghum bicolor
Sobic.007G159700 5.0kb downstream 5.0kb downstream 8069 true Chr07: 59401245-59409313 Sorghum bicolor
Sobic.007G159700 5.0kb downstream 5.0kb downstream 5000 false Chr07: 59401245-59406244 Sorghum bicolor
Sobic.007G159700 10.0kb upstream 10.0kb upstream 13069 true Chr07: 59406245-59419313 Sorghum bicolor
Sobic.007G159700 10.0kb upstream 10.0kb upstream 10000 false Chr07: 59409314-59419313 Sorghum bicolor
Sobic.007G159700 10.0kb downstream 10.0kb downstream 13069 true Chr07: 59396245-59409313 Sorghum bicolor
Sobic.007G159700 10.0kb downstream 10.0kb downstream 10000 false Chr07: 59396245-59406244 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179099 5267 Panicoideae View MSA
124585577 5269 Grass View MSA
122044674 5273 Angiosperm View MSA
121348780 5274 Embryophyte View MSA
123427707 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.612     High High
cufflinks 45.922     High Low
cufflinks 43.573     High Low
cufflinks 58.792     High  
cufflinks 58.419     High  
cufflinks 60.226     High  
cufflinks 65.264     High  
cufflinks 45.28     High Low
cufflinks 50.447     High  
cufflinks 62.32     High  
cufflinks 88.847     High  
cufflinks 74.736     High  
cufflinks 54.612     High  
cufflinks 103.568     High High
cufflinks 73.094     High  
cufflinks 54.46     High  
cufflinks 67.021     High  
cufflinks 71.203     High  
cufflinks 33.679     High Low
cufflinks 64.862     High  
cufflinks 38.535     High Low
cufflinks 128.538     High High
cufflinks 104.227     High High
cufflinks 101.628     High High
cufflinks 33.817     High Low
cufflinks 43.251     High Low
cufflinks 59.1     High  
cufflinks 72.764     High  
cufflinks 68.639     High  
cufflinks 58.604     High  

0 Strain