Gene : Sobic.007G217000 S. bicolor v3.1.1
Defline:  (1 of 1) K13342 - peroxin-5 (PEX5, PXR1) Genomic Order:  2260
Name:  ? Sobic.007G217000 Secondary Identifier:  ? PAC:37936706
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G217000 0.5kb upstream 0.5kb upstream 8433 true Chr07: 64521721-64530153 Sorghum bicolor
Sobic.007G217000 0.5kb upstream 0.5kb upstream 500 false Chr07: 64529654-64530153 Sorghum bicolor
Sobic.007G217000 0.5kb downstream 0.5kb downstream 8433 true Chr07: 64521221-64529653 Sorghum bicolor
Sobic.007G217000 0.5kb downstream 0.5kb downstream 500 false Chr07: 64521221-64521720 Sorghum bicolor
Sobic.007G217000 1.0kb upstream 1.0kb upstream 8933 true Chr07: 64521721-64530653 Sorghum bicolor
Sobic.007G217000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 64529654-64530653 Sorghum bicolor
Sobic.007G217000 1.0kb downstream 1.0kb downstream 8933 true Chr07: 64520721-64529653 Sorghum bicolor
Sobic.007G217000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 64520721-64521720 Sorghum bicolor
Sobic.007G217000 2.0kb upstream 2.0kb upstream 9933 true Chr07: 64521721-64531653 Sorghum bicolor
Sobic.007G217000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 64529654-64531653 Sorghum bicolor
Sobic.007G217000 2.0kb downstream 2.0kb downstream 9933 true Chr07: 64519721-64529653 Sorghum bicolor
Sobic.007G217000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 64519721-64521720 Sorghum bicolor
Sobic.007G217000 5.0kb upstream 5.0kb upstream 12933 true Chr07: 64521721-64534653 Sorghum bicolor
Sobic.007G217000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 64529654-64534653 Sorghum bicolor
Sobic.007G217000 5.0kb downstream 5.0kb downstream 12933 true Chr07: 64516721-64529653 Sorghum bicolor
Sobic.007G217000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 64516721-64521720 Sorghum bicolor
Sobic.007G217000 10.0kb upstream 10.0kb upstream 17933 true Chr07: 64521721-64539653 Sorghum bicolor
Sobic.007G217000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 64529654-64539653 Sorghum bicolor
Sobic.007G217000 10.0kb downstream 10.0kb downstream 17933 true Chr07: 64511721-64529653 Sorghum bicolor
Sobic.007G217000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 64511721-64521720 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043170 5273 Angiosperm View MSA
122188384 5267 Panicoideae View MSA
124576148 5269 Grass View MSA
121345209 5274 Embryophyte View MSA
123423857 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.575        
cufflinks 4.14       Low
cufflinks 6.237        
cufflinks 7.997        
cufflinks 5.203        
cufflinks 9.215       High
cufflinks 4.514       Low
cufflinks 4.41       Low
cufflinks 12.621     High High
cufflinks 11.091       High
cufflinks 6.79        
cufflinks 8.327        
cufflinks 8.714        
cufflinks 7.62        
cufflinks 7.414        
cufflinks 6.809        
cufflinks 4.53       Low
cufflinks 4.516       Low
cufflinks 6.747        
cufflinks 6.388        
cufflinks 3.561       Low
cufflinks 6.918        
cufflinks 7.112        
cufflinks 6.783        
cufflinks 6.615        
cufflinks 4.445       Low
cufflinks 9.368       High
cufflinks 12.673     High High
cufflinks 4.893        
cufflinks 7.56        

0 Strain