Gene : Sobic.007G206000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR10366//PTHR10366:SF307 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // TETRAKETIDE ALPHA-PYRONE REDUCTASE 1 Genomic Order:  2148
Name:  ? Sobic.007G206000 Secondary Identifier:  ? PAC:37936427
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G206000 0.5kb upstream 0.5kb upstream 2924 true Chr07: 63606437-63609360 Sorghum bicolor
Sobic.007G206000 0.5kb upstream 0.5kb upstream 500 false Chr07: 63606437-63606936 Sorghum bicolor
Sobic.007G206000 0.5kb downstream 0.5kb downstream 2924 true Chr07: 63606937-63609860 Sorghum bicolor
Sobic.007G206000 0.5kb downstream 0.5kb downstream 500 false Chr07: 63609361-63609860 Sorghum bicolor
Sobic.007G206000 1.0kb upstream 1.0kb upstream 3424 true Chr07: 63605937-63609360 Sorghum bicolor
Sobic.007G206000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 63605937-63606936 Sorghum bicolor
Sobic.007G206000 1.0kb downstream 1.0kb downstream 3424 true Chr07: 63606937-63610360 Sorghum bicolor
Sobic.007G206000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 63609361-63610360 Sorghum bicolor
Sobic.007G206000 2.0kb upstream 2.0kb upstream 4424 true Chr07: 63604937-63609360 Sorghum bicolor
Sobic.007G206000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 63604937-63606936 Sorghum bicolor
Sobic.007G206000 2.0kb downstream 2.0kb downstream 4424 true Chr07: 63606937-63611360 Sorghum bicolor
Sobic.007G206000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 63609361-63611360 Sorghum bicolor
Sobic.007G206000 5.0kb upstream 5.0kb upstream 7424 true Chr07: 63601937-63609360 Sorghum bicolor
Sobic.007G206000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 63601937-63606936 Sorghum bicolor
Sobic.007G206000 5.0kb downstream 5.0kb downstream 7424 true Chr07: 63606937-63614360 Sorghum bicolor
Sobic.007G206000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 63609361-63614360 Sorghum bicolor
Sobic.007G206000 10.0kb upstream 10.0kb upstream 12424 true Chr07: 63596937-63609360 Sorghum bicolor
Sobic.007G206000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 63596937-63606936 Sorghum bicolor
Sobic.007G206000 10.0kb downstream 10.0kb downstream 12424 true Chr07: 63606937-63619360 Sorghum bicolor
Sobic.007G206000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 63609361-63619360 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179500 5267 Panicoideae View MSA
124585951 5269 Grass View MSA
122047084 5273 Angiosperm View MSA
121347688 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.572        
cufflinks 0.089       Low
cufflinks 0.219        
cufflinks 0.41        
cufflinks 0.861       High
cufflinks 0.697        
cufflinks 0.298        
cufflinks 0.075       Low
cufflinks 0.925       High
cufflinks 0.943       High
cufflinks 0.126       Low
cufflinks 0.41        
cufflinks 0.573        
cufflinks 0.245        
cufflinks 0.893       High
cufflinks 0.283        
cufflinks 0.146        
cufflinks 0.25        
cufflinks 0.161        
cufflinks 0.525        
cufflinks 1.81       High
cufflinks 0.115     Low Low
cufflinks 0.177        
cufflinks 0.2        
cufflinks 0.3        
cufflinks 0.116       Low
cufflinks 0.303        
cufflinks 3.309       High
cufflinks 0.174        
cufflinks 1.011       High

0 Strain