Gene : Sobic.007G192100 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  2005
Name:  ? Sobic.007G192100 Secondary Identifier:  ? PAC:37935039
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G192100 0.5kb upstream 0.5kb upstream 3767 true Chr07: 62489182-62492948 Sorghum bicolor
Sobic.007G192100 0.5kb upstream 0.5kb upstream 500 false Chr07: 62489182-62489681 Sorghum bicolor
Sobic.007G192100 0.5kb downstream 0.5kb downstream 3767 true Chr07: 62489682-62493448 Sorghum bicolor
Sobic.007G192100 0.5kb downstream 0.5kb downstream 500 false Chr07: 62492949-62493448 Sorghum bicolor
Sobic.007G192100 1.0kb upstream 1.0kb upstream 4267 true Chr07: 62488682-62492948 Sorghum bicolor
Sobic.007G192100 1.0kb upstream 1.0kb upstream 1000 false Chr07: 62488682-62489681 Sorghum bicolor
Sobic.007G192100 1.0kb downstream 1.0kb downstream 4267 true Chr07: 62489682-62493948 Sorghum bicolor
Sobic.007G192100 1.0kb downstream 1.0kb downstream 1000 false Chr07: 62492949-62493948 Sorghum bicolor
Sobic.007G192100 2.0kb upstream 2.0kb upstream 5267 true Chr07: 62487682-62492948 Sorghum bicolor
Sobic.007G192100 2.0kb upstream 2.0kb upstream 2000 false Chr07: 62487682-62489681 Sorghum bicolor
Sobic.007G192100 2.0kb downstream 2.0kb downstream 5267 true Chr07: 62489682-62494948 Sorghum bicolor
Sobic.007G192100 2.0kb downstream 2.0kb downstream 2000 false Chr07: 62492949-62494948 Sorghum bicolor
Sobic.007G192100 5.0kb upstream 5.0kb upstream 8267 true Chr07: 62484682-62492948 Sorghum bicolor
Sobic.007G192100 5.0kb upstream 5.0kb upstream 5000 false Chr07: 62484682-62489681 Sorghum bicolor
Sobic.007G192100 5.0kb downstream 5.0kb downstream 8267 true Chr07: 62489682-62497948 Sorghum bicolor
Sobic.007G192100 5.0kb downstream 5.0kb downstream 5000 false Chr07: 62492949-62497948 Sorghum bicolor
Sobic.007G192100 10.0kb upstream 10.0kb upstream 13267 true Chr07: 62479682-62492948 Sorghum bicolor
Sobic.007G192100 10.0kb upstream 10.0kb upstream 10000 false Chr07: 62479682-62489681 Sorghum bicolor
Sobic.007G192100 10.0kb downstream 10.0kb downstream 13267 true Chr07: 62489682-62502948 Sorghum bicolor
Sobic.007G192100 10.0kb downstream 10.0kb downstream 10000 false Chr07: 62492949-62502948 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181181 5267 Panicoideae View MSA
124574754 5269 Grass View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.443     High High
cufflinks 4.79       Low
cufflinks 16.351     High  
cufflinks 25.882     High  
cufflinks 33.193     High  
cufflinks 15.251     High  
cufflinks 27.147     High  
cufflinks 9.229     High Low
cufflinks 30.556     High  
cufflinks 28.222     High  
cufflinks 33.809     High  
cufflinks 40.22     High  
cufflinks 25.078     High  
cufflinks 46.179     High  
cufflinks 34.187     High  
cufflinks 17.386     High  
cufflinks 30.644     High  
cufflinks 28.744     High  
cufflinks 15.75     High  
cufflinks 41.257     High  
cufflinks 40.718     High  
cufflinks 44.52     High  
cufflinks 46.964     High  
cufflinks 49.425     High  
cufflinks 10.419     High Low
cufflinks 4.517       Low
cufflinks 30.685     High  
cufflinks 128.769     High High
cufflinks 20.127     High  
cufflinks 39.021     High  

0 Strain