Gene : Sobic.008G010600 S. bicolor v3.1.1
Defline:  (1 of 14) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  105
Name:  ? Sobic.008G010600 Secondary Identifier:  ? PAC:37926261
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G010600 0.5kb upstream 0.5kb upstream 2415   true Chr08: 875221-877635 Sorghum bicolor
Sobic.008G010600 0.5kb upstream 0.5kb upstream 500   false Chr08: 875221-875720 Sorghum bicolor
Sobic.008G010600 0.5kb downstream 0.5kb downstream 2415   true Chr08: 875721-878135 Sorghum bicolor
Sobic.008G010600 0.5kb downstream 0.5kb downstream 500   false Chr08: 877636-878135 Sorghum bicolor
Sobic.008G010600 1.0kb upstream 1.0kb upstream 2915   true Chr08: 874721-877635 Sorghum bicolor
Sobic.008G010600 1.0kb upstream 1.0kb upstream 1000   false Chr08: 874721-875720 Sorghum bicolor
Sobic.008G010600 1.0kb downstream 1.0kb downstream 2915   true Chr08: 875721-878635 Sorghum bicolor
Sobic.008G010600 1.0kb downstream 1.0kb downstream 1000   false Chr08: 877636-878635 Sorghum bicolor
Sobic.008G010600 2.0kb upstream 2.0kb upstream 3915   true Chr08: 873721-877635 Sorghum bicolor
Sobic.008G010600 2.0kb upstream 2.0kb upstream 2000   false Chr08: 873721-875720 Sorghum bicolor
Sobic.008G010600 2.0kb downstream 2.0kb downstream 3915   true Chr08: 875721-879635 Sorghum bicolor
Sobic.008G010600 2.0kb downstream 2.0kb downstream 2000   false Chr08: 877636-879635 Sorghum bicolor
Sobic.008G010600 5.0kb upstream 5.0kb upstream 6915   true Chr08: 870721-877635 Sorghum bicolor
Sobic.008G010600 5.0kb upstream 5.0kb upstream 5000   false Chr08: 870721-875720 Sorghum bicolor
Sobic.008G010600 5.0kb downstream 5.0kb downstream 6915   true Chr08: 875721-882635 Sorghum bicolor
Sobic.008G010600 5.0kb downstream 5.0kb downstream 5000   false Chr08: 877636-882635 Sorghum bicolor
Sobic.008G010600 10.0kb upstream 10.0kb upstream 11915   true Chr08: 865721-877635 Sorghum bicolor
Sobic.008G010600 10.0kb upstream 10.0kb upstream 10000   false Chr08: 865721-875720 Sorghum bicolor
Sobic.008G010600 10.0kb downstream 10.0kb downstream 11915   true Chr08: 875721-887635 Sorghum bicolor
Sobic.008G010600 10.0kb downstream 10.0kb downstream 10000   false Chr08: 877636-887635 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184131 5267 Panicoideae View MSA
124590856 5269 Grass View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.948        
cufflinks 0.083       Low
cufflinks 0.04     Low Low
cufflinks 0.008     Low Low
cufflinks 2.377        
cufflinks 0.226        
cufflinks 3.345        
cufflinks 1.528        
cufflinks 0.4        
cufflinks 0.565        
cufflinks 2.547        
cufflinks 2.934        
cufflinks 2.706        
cufflinks 4.457        
cufflinks 2.731        
cufflinks 0.026     Low Low
cufflinks 3.182        
cufflinks 2.947        
cufflinks 0.32        
cufflinks 3.367        
cufflinks 2.031        
cufflinks 6.1        
cufflinks 3.215        
cufflinks 3.201        
cufflinks 0.065       Low
cufflinks 0.139       Low
cufflinks 1.464        
cufflinks 0.118       Low
cufflinks 5.464        
cufflinks 1.615        

0 Strain