Gene : Sobic.008G003200 S. bicolor v3.1.1
Defline:  (1 of 6) K10257 - omega-3 fatty acid desaturase (delta-15 desaturase) (FAD8, desB) Genomic Order:  31
Name:  ? Sobic.008G003200 Secondary Identifier:  ? PAC:37926420
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G003200 0.5kb upstream 0.5kb upstream 5500   true Chr08: 280208-285707 Sorghum bicolor
Sobic.008G003200 0.5kb upstream 0.5kb upstream 500   false Chr08: 285208-285707 Sorghum bicolor
Sobic.008G003200 0.5kb downstream 0.5kb downstream 5500   true Chr08: 279708-285207 Sorghum bicolor
Sobic.008G003200 0.5kb downstream 0.5kb downstream 500   false Chr08: 279708-280207 Sorghum bicolor
Sobic.008G003200 1.0kb upstream 1.0kb upstream 6000   true Chr08: 280208-286207 Sorghum bicolor
Sobic.008G003200 1.0kb upstream 1.0kb upstream 1000   false Chr08: 285208-286207 Sorghum bicolor
Sobic.008G003200 1.0kb downstream 1.0kb downstream 6000   true Chr08: 279208-285207 Sorghum bicolor
Sobic.008G003200 1.0kb downstream 1.0kb downstream 1000   false Chr08: 279208-280207 Sorghum bicolor
Sobic.008G003200 2.0kb upstream 2.0kb upstream 7000   true Chr08: 280208-287207 Sorghum bicolor
Sobic.008G003200 2.0kb upstream 2.0kb upstream 2000   false Chr08: 285208-287207 Sorghum bicolor
Sobic.008G003200 2.0kb downstream 2.0kb downstream 7000   true Chr08: 278208-285207 Sorghum bicolor
Sobic.008G003200 2.0kb downstream 2.0kb downstream 2000   false Chr08: 278208-280207 Sorghum bicolor
Sobic.008G003200 5.0kb upstream 5.0kb upstream 10000   true Chr08: 280208-290207 Sorghum bicolor
Sobic.008G003200 5.0kb upstream 5.0kb upstream 5000   false Chr08: 285208-290207 Sorghum bicolor
Sobic.008G003200 5.0kb downstream 5.0kb downstream 10000   true Chr08: 275208-285207 Sorghum bicolor
Sobic.008G003200 5.0kb downstream 5.0kb downstream 5000   false Chr08: 275208-280207 Sorghum bicolor
Sobic.008G003200 10.0kb upstream 10.0kb upstream 15000   true Chr08: 280208-295207 Sorghum bicolor
Sobic.008G003200 10.0kb upstream 10.0kb upstream 10000   false Chr08: 285208-295207 Sorghum bicolor
Sobic.008G003200 10.0kb downstream 10.0kb downstream 15000   true Chr08: 270208-285207 Sorghum bicolor
Sobic.008G003200 10.0kb downstream 10.0kb downstream 10000   false Chr08: 270208-280207 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122019953 5273 Angiosperm View MSA
122193070 5267 Panicoideae View MSA
124581434 5269 Grass View MSA
121351532 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.262        
cufflinks 0.117       Low
cufflinks 0.068       Low
cufflinks 0.029     Low Low
cufflinks 1.078        
cufflinks 0.138       Low
cufflinks 1.241        
cufflinks 0.761        
cufflinks 0.213        
cufflinks 0.969        
cufflinks 1.764        
cufflinks 2.219        
cufflinks 0.512        
cufflinks 1.989        
cufflinks 3.862       High
cufflinks 0.101       Low
cufflinks 1.283        
cufflinks 1.131        
cufflinks 0.292        
cufflinks 1.033        
cufflinks 0.037     Low Low
cufflinks 5.279       High
cufflinks 3.23        
cufflinks 3.89       High
cufflinks 0.083       Low
cufflinks 0.059       Low
cufflinks 0.308        
cufflinks 0.151        
cufflinks 1.893        
cufflinks 3.326        

0 Strain