Gene : Sobic.007G225500 S. bicolor v3.1.1
Defline:  similar to Os08g0484800 protein Genomic Order:  2352
Name:  ? Sobic.007G225500 Secondary Identifier:  ? PAC:37936809
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.007G225500 0.5kb upstream 0.5kb upstream 4182 true Chr07: 65295969-65300150 Sorghum bicolor
Sobic.007G225500 0.5kb upstream 0.5kb upstream 500 false Chr07: 65299651-65300150 Sorghum bicolor
Sobic.007G225500 0.5kb downstream 0.5kb downstream 4182 true Chr07: 65295469-65299650 Sorghum bicolor
Sobic.007G225500 0.5kb downstream 0.5kb downstream 500 false Chr07: 65295469-65295968 Sorghum bicolor
Sobic.007G225500 1.0kb upstream 1.0kb upstream 4682 true Chr07: 65295969-65300650 Sorghum bicolor
Sobic.007G225500 1.0kb upstream 1.0kb upstream 1000 false Chr07: 65299651-65300650 Sorghum bicolor
Sobic.007G225500 1.0kb downstream 1.0kb downstream 4682 true Chr07: 65294969-65299650 Sorghum bicolor
Sobic.007G225500 1.0kb downstream 1.0kb downstream 1000 false Chr07: 65294969-65295968 Sorghum bicolor
Sobic.007G225500 2.0kb upstream 2.0kb upstream 5682 true Chr07: 65295969-65301650 Sorghum bicolor
Sobic.007G225500 2.0kb upstream 2.0kb upstream 2000 false Chr07: 65299651-65301650 Sorghum bicolor
Sobic.007G225500 2.0kb downstream 2.0kb downstream 5682 true Chr07: 65293969-65299650 Sorghum bicolor
Sobic.007G225500 2.0kb downstream 2.0kb downstream 2000 false Chr07: 65293969-65295968 Sorghum bicolor
Sobic.007G225500 5.0kb upstream 5.0kb upstream 8682 true Chr07: 65295969-65304650 Sorghum bicolor
Sobic.007G225500 5.0kb upstream 5.0kb upstream 5000 false Chr07: 65299651-65304650 Sorghum bicolor
Sobic.007G225500 5.0kb downstream 5.0kb downstream 8682 true Chr07: 65290969-65299650 Sorghum bicolor
Sobic.007G225500 5.0kb downstream 5.0kb downstream 5000 false Chr07: 65290969-65295968 Sorghum bicolor
Sobic.007G225500 10.0kb upstream 10.0kb upstream 13682 true Chr07: 65295969-65309650 Sorghum bicolor
Sobic.007G225500 10.0kb upstream 10.0kb upstream 10000 false Chr07: 65299651-65309650 Sorghum bicolor
Sobic.007G225500 10.0kb downstream 10.0kb downstream 13682 true Chr07: 65285969-65299650 Sorghum bicolor
Sobic.007G225500 10.0kb downstream 10.0kb downstream 10000 false Chr07: 65285969-65295968 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026188 5273 Angiosperm View MSA
122189356 5267 Panicoideae View MSA
124583728 5269 Grass View MSA
121345010 5274 Embryophyte View MSA
123380138 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.282        
cufflinks 33.233     High High
cufflinks 9.904     High High
cufflinks 3.83        
cufflinks 1.088        
cufflinks 10.027       High
cufflinks 11.474     High High
cufflinks 15.294     High High
cufflinks 1.17        
cufflinks 1.41        
cufflinks 0.396       Low
cufflinks 0.426       Low
cufflinks 1.456        
cufflinks 0.476       Low
cufflinks 2.678        
cufflinks 19.968     High High
cufflinks 9.418        
cufflinks 14.247     High High
cufflinks 12.611     High High
cufflinks 6.05        
cufflinks 2.119        
cufflinks 0.49       Low
cufflinks 0.553       Low
cufflinks 0.493       Low
cufflinks 21.634     High High
cufflinks 30.396     High High
cufflinks 0.461       Low
cufflinks 2.089        
cufflinks 8.008        
cufflinks 1.858        

0 Strain