Gene : Sobic.008G037300 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11362:SF13 - PROTEIN TERMINAL FLOWER 1 Genomic Order:  384
Name:  ? Sobic.008G037300 Secondary Identifier:  ? PAC:37927234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G037300 0.5kb upstream 0.5kb upstream 1687   true Chr08: 3535584-3537270 Sorghum bicolor
Sobic.008G037300 0.5kb upstream 0.5kb upstream 500   false Chr08: 3536771-3537270 Sorghum bicolor
Sobic.008G037300 0.5kb downstream 0.5kb downstream 1687   true Chr08: 3535084-3536770 Sorghum bicolor
Sobic.008G037300 0.5kb downstream 0.5kb downstream 500   false Chr08: 3535084-3535583 Sorghum bicolor
Sobic.008G037300 1.0kb upstream 1.0kb upstream 2187   true Chr08: 3535584-3537770 Sorghum bicolor
Sobic.008G037300 1.0kb upstream 1.0kb upstream 1000   false Chr08: 3536771-3537770 Sorghum bicolor
Sobic.008G037300 1.0kb downstream 1.0kb downstream 2187   true Chr08: 3534584-3536770 Sorghum bicolor
Sobic.008G037300 1.0kb downstream 1.0kb downstream 1000   false Chr08: 3534584-3535583 Sorghum bicolor
Sobic.008G037300 2.0kb upstream 2.0kb upstream 3187   true Chr08: 3535584-3538770 Sorghum bicolor
Sobic.008G037300 2.0kb upstream 2.0kb upstream 2000   false Chr08: 3536771-3538770 Sorghum bicolor
Sobic.008G037300 2.0kb downstream 2.0kb downstream 3187   true Chr08: 3533584-3536770 Sorghum bicolor
Sobic.008G037300 2.0kb downstream 2.0kb downstream 2000   false Chr08: 3533584-3535583 Sorghum bicolor
Sobic.008G037300 5.0kb upstream 5.0kb upstream 6187   true Chr08: 3535584-3541770 Sorghum bicolor
Sobic.008G037300 5.0kb upstream 5.0kb upstream 5000   false Chr08: 3536771-3541770 Sorghum bicolor
Sobic.008G037300 5.0kb downstream 5.0kb downstream 6187   true Chr08: 3530584-3536770 Sorghum bicolor
Sobic.008G037300 5.0kb downstream 5.0kb downstream 5000   false Chr08: 3530584-3535583 Sorghum bicolor
Sobic.008G037300 10.0kb upstream 10.0kb upstream 11187   true Chr08: 3535584-3546770 Sorghum bicolor
Sobic.008G037300 10.0kb upstream 10.0kb upstream 10000   false Chr08: 3536771-3546770 Sorghum bicolor
Sobic.008G037300 10.0kb downstream 10.0kb downstream 11187   true Chr08: 3525584-3536770 Sorghum bicolor
Sobic.008G037300 10.0kb downstream 10.0kb downstream 10000   false Chr08: 3525584-3535583 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198471 5267 Panicoideae View MSA
124590595 5269 Grass View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.017     Low Low
cufflinks 0.016     Low Low
cufflinks 0.223        
cufflinks 0.233        
cufflinks 12.022       High
cufflinks 0.15        
cufflinks 1.528        
cufflinks 0.102       Low
cufflinks 13.853     High High
cufflinks 15.064     High High
cufflinks 1.115        
cufflinks 1.991        
cufflinks 27.26     High High
cufflinks 1.307        
cufflinks 0.518        
cufflinks 0.081       Low
cufflinks 1.856        
cufflinks 1.371        
cufflinks 0.159        
cufflinks 0.602        
cufflinks 1.824        
cufflinks 0.25        
cufflinks 2.014        
cufflinks 0.537        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.05       Low
cufflinks 3.979        
cufflinks 0.019     Low Low
cufflinks 0.323        
cufflinks 0.674        

0 Strain