Gene : Sobic.008G030000 S. bicolor v3.1.1
Defline:  (1 of 1) K02356 - elongation factor P (efp) Genomic Order:  309
Name:  ? Sobic.008G030000 Secondary Identifier:  ? PAC:37926860
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G030000 0.5kb upstream 0.5kb upstream 2940   true Chr08: 2672794-2675733 Sorghum bicolor
Sobic.008G030000 0.5kb upstream 0.5kb upstream 500   false Chr08: 2675234-2675733 Sorghum bicolor
Sobic.008G030000 0.5kb downstream 0.5kb downstream 2940   true Chr08: 2672294-2675233 Sorghum bicolor
Sobic.008G030000 0.5kb downstream 0.5kb downstream 500   false Chr08: 2672294-2672793 Sorghum bicolor
Sobic.008G030000 1.0kb upstream 1.0kb upstream 3440   true Chr08: 2672794-2676233 Sorghum bicolor
Sobic.008G030000 1.0kb upstream 1.0kb upstream 1000   false Chr08: 2675234-2676233 Sorghum bicolor
Sobic.008G030000 1.0kb downstream 1.0kb downstream 3440   true Chr08: 2671794-2675233 Sorghum bicolor
Sobic.008G030000 1.0kb downstream 1.0kb downstream 1000   false Chr08: 2671794-2672793 Sorghum bicolor
Sobic.008G030000 2.0kb upstream 2.0kb upstream 4440   true Chr08: 2672794-2677233 Sorghum bicolor
Sobic.008G030000 2.0kb upstream 2.0kb upstream 2000   false Chr08: 2675234-2677233 Sorghum bicolor
Sobic.008G030000 2.0kb downstream 2.0kb downstream 4440   true Chr08: 2670794-2675233 Sorghum bicolor
Sobic.008G030000 2.0kb downstream 2.0kb downstream 2000   false Chr08: 2670794-2672793 Sorghum bicolor
Sobic.008G030000 5.0kb upstream 5.0kb upstream 7440   true Chr08: 2672794-2680233 Sorghum bicolor
Sobic.008G030000 5.0kb upstream 5.0kb upstream 5000   false Chr08: 2675234-2680233 Sorghum bicolor
Sobic.008G030000 5.0kb downstream 5.0kb downstream 7440   true Chr08: 2667794-2675233 Sorghum bicolor
Sobic.008G030000 5.0kb downstream 5.0kb downstream 5000   false Chr08: 2667794-2672793 Sorghum bicolor
Sobic.008G030000 10.0kb upstream 10.0kb upstream 12440   true Chr08: 2672794-2685233 Sorghum bicolor
Sobic.008G030000 10.0kb upstream 10.0kb upstream 10000   false Chr08: 2675234-2685233 Sorghum bicolor
Sobic.008G030000 10.0kb downstream 10.0kb downstream 12440   true Chr08: 2662794-2675233 Sorghum bicolor
Sobic.008G030000 10.0kb downstream 10.0kb downstream 10000   false Chr08: 2662794-2672793 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180813 5267 Panicoideae View MSA
124577280 5269 Grass View MSA
122051510 5273 Angiosperm View MSA
121347345 5274 Embryophyte View MSA
123424551 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.751        
cufflinks 8.076     High  
cufflinks 10.742     High  
cufflinks 3.825        
cufflinks 2.729        
cufflinks 7.429        
cufflinks 34.863     High High
cufflinks 49.593     High High
cufflinks 2.356        
cufflinks 2.107        
cufflinks 0.509       Low
cufflinks 0.625       Low
cufflinks 1.729        
cufflinks 0.39       Low
cufflinks 4.534        
cufflinks 6.414        
cufflinks 34.909     High High
cufflinks 47.821     High High
cufflinks 9.534        
cufflinks 12.773     High  
cufflinks 3.138        
cufflinks 0.636       Low
cufflinks 0.801        
cufflinks 0.747        
cufflinks 1.397        
cufflinks 4.692        
cufflinks 0.323       Low
cufflinks 0.13       Low
cufflinks 102.925     High High
cufflinks 7.049        

0 Strain