Gene : Sobic.008G018500 S. bicolor v3.1.1
Defline:  (1 of 4) 2.7.1.137 - Phosphatidylinositol 3-kinase / Type III phosphoinositide 3-kinase Genomic Order:  190
Name:  ? Sobic.008G018500 Secondary Identifier:  ? PAC:37926380
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6352 Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G018500 0.5kb upstream 0.5kb upstream 4227   true Chr08: 1500664-1504890 Sorghum bicolor
Sobic.008G018500 0.5kb upstream 0.5kb upstream 500   false Chr08: 1500664-1501163 Sorghum bicolor
Sobic.008G018500 0.5kb downstream 0.5kb downstream 4227   true Chr08: 1501164-1505390 Sorghum bicolor
Sobic.008G018500 0.5kb downstream 0.5kb downstream 500   false Chr08: 1504891-1505390 Sorghum bicolor
Sobic.008G018500 1.0kb upstream 1.0kb upstream 4727   true Chr08: 1500164-1504890 Sorghum bicolor
Sobic.008G018500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 1500164-1501163 Sorghum bicolor
Sobic.008G018500 1.0kb downstream 1.0kb downstream 4727   true Chr08: 1501164-1505890 Sorghum bicolor
Sobic.008G018500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 1504891-1505890 Sorghum bicolor
Sobic.008G018500 2.0kb upstream 2.0kb upstream 5727   true Chr08: 1499164-1504890 Sorghum bicolor
Sobic.008G018500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 1499164-1501163 Sorghum bicolor
Sobic.008G018500 2.0kb downstream 2.0kb downstream 5727   true Chr08: 1501164-1506890 Sorghum bicolor
Sobic.008G018500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 1504891-1506890 Sorghum bicolor
Sobic.008G018500 5.0kb upstream 5.0kb upstream 8727   true Chr08: 1496164-1504890 Sorghum bicolor
Sobic.008G018500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 1496164-1501163 Sorghum bicolor
Sobic.008G018500 5.0kb downstream 5.0kb downstream 8727   true Chr08: 1501164-1509890 Sorghum bicolor
Sobic.008G018500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 1504891-1509890 Sorghum bicolor
Sobic.008G018500 10.0kb upstream 10.0kb upstream 13727   true Chr08: 1491164-1504890 Sorghum bicolor
Sobic.008G018500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 1491164-1501163 Sorghum bicolor
Sobic.008G018500 10.0kb downstream 10.0kb downstream 13727   true Chr08: 1501164-1514890 Sorghum bicolor
Sobic.008G018500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 1504891-1514890 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181534 5267 Panicoideae View MSA
124585937 5269 Grass View MSA
122042854 5273 Angiosperm View MSA
121346358 5274 Embryophyte View MSA
123428663 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.969        
cufflinks 0.873       Low
cufflinks 1.675        
cufflinks 2.268        
cufflinks 2.646        
cufflinks 3.339        
cufflinks 2.081        
cufflinks 1.125       Low
cufflinks 2.93        
cufflinks 2.949        
cufflinks 2.74        
cufflinks 3.381        
cufflinks 2.841        
cufflinks 3.003        
cufflinks 3.004        
cufflinks 1.844        
cufflinks 2.154        
cufflinks 2.131        
cufflinks 1.578       Low
cufflinks 2.582        
cufflinks 4.185       High
cufflinks 3.661       High
cufflinks 3.402        
cufflinks 3.33        
cufflinks 1.358       Low
cufflinks 0.795       Low
cufflinks 2.027        
cufflinks 3.831       High
cufflinks 1.772        
cufflinks 3.264        

0 Strain