Gene : Sobic.008G055900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF48 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  574
Name:  ? Sobic.008G055900 Secondary Identifier:  ? PAC:37926353
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G055900 0.5kb upstream 0.5kb upstream 5912   true Chr08: 5776605-5782516 Sorghum bicolor
Sobic.008G055900 0.5kb upstream 0.5kb upstream 500   false Chr08: 5782017-5782516 Sorghum bicolor
Sobic.008G055900 0.5kb downstream 0.5kb downstream 5912   true Chr08: 5776105-5782016 Sorghum bicolor
Sobic.008G055900 0.5kb downstream 0.5kb downstream 500   false Chr08: 5776105-5776604 Sorghum bicolor
Sobic.008G055900 1.0kb upstream 1.0kb upstream 6412   true Chr08: 5776605-5783016 Sorghum bicolor
Sobic.008G055900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 5782017-5783016 Sorghum bicolor
Sobic.008G055900 1.0kb downstream 1.0kb downstream 6412   true Chr08: 5775605-5782016 Sorghum bicolor
Sobic.008G055900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 5775605-5776604 Sorghum bicolor
Sobic.008G055900 2.0kb upstream 2.0kb upstream 7412   true Chr08: 5776605-5784016 Sorghum bicolor
Sobic.008G055900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 5782017-5784016 Sorghum bicolor
Sobic.008G055900 2.0kb downstream 2.0kb downstream 7412   true Chr08: 5774605-5782016 Sorghum bicolor
Sobic.008G055900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 5774605-5776604 Sorghum bicolor
Sobic.008G055900 5.0kb upstream 5.0kb upstream 10412   true Chr08: 5776605-5787016 Sorghum bicolor
Sobic.008G055900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 5782017-5787016 Sorghum bicolor
Sobic.008G055900 5.0kb downstream 5.0kb downstream 10412   true Chr08: 5771605-5782016 Sorghum bicolor
Sobic.008G055900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 5771605-5776604 Sorghum bicolor
Sobic.008G055900 10.0kb upstream 10.0kb upstream 15412   true Chr08: 5776605-5792016 Sorghum bicolor
Sobic.008G055900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 5782017-5792016 Sorghum bicolor
Sobic.008G055900 10.0kb downstream 10.0kb downstream 15412   true Chr08: 5766605-5782016 Sorghum bicolor
Sobic.008G055900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 5766605-5776604 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194638 5267 Panicoideae View MSA
124571477 5269 Grass View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.547     High  
cufflinks 10.208     High Low
cufflinks 21.118     High Low
cufflinks 29.43     High  
cufflinks 48.918     High  
cufflinks 22.893     High  
cufflinks 38.408     High  
cufflinks 19.821     High Low
cufflinks 46.064     High  
cufflinks 44.927     High  
cufflinks 48.605     High  
cufflinks 57.744     High  
cufflinks 47.871     High  
cufflinks 57.009     High  
cufflinks 41.113     High  
cufflinks 20.612     High Low
cufflinks 37.211     High  
cufflinks 41.279     High  
cufflinks 21.771     High Low
cufflinks 45.154     High  
cufflinks 42.56     High  
cufflinks 56.871     High  
cufflinks 64.388     High High
cufflinks 63.054     High  
cufflinks 20.532     High Low
cufflinks 10.805     High Low
cufflinks 47.421     High  
cufflinks 20.306     High Low
cufflinks 45.775     High  
cufflinks 50.38     High  

0 Strain