Gene : Sobic.008G057500 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11699//PTHR11699:SF175 - ALDEHYDE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  589
Name:  ? Sobic.008G057500 Secondary Identifier:  ? PAC:37928646
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-2724 Sorghum bicolor pathologic  
Sbicolor PWY66-21 Sorghum bicolor pathologic  
Sbicolor PWY66-389 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G057500 0.5kb upstream 0.5kb upstream 6812   true Chr08: 5994322-6001133 Sorghum bicolor
Sobic.008G057500 0.5kb upstream 0.5kb upstream 500   false Chr08: 5994322-5994821 Sorghum bicolor
Sobic.008G057500 0.5kb downstream 0.5kb downstream 6812   true Chr08: 5994822-6001633 Sorghum bicolor
Sobic.008G057500 0.5kb downstream 0.5kb downstream 500   false Chr08: 6001134-6001633 Sorghum bicolor
Sobic.008G057500 1.0kb upstream 1.0kb upstream 7312   true Chr08: 5993822-6001133 Sorghum bicolor
Sobic.008G057500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 5993822-5994821 Sorghum bicolor
Sobic.008G057500 1.0kb downstream 1.0kb downstream 7312   true Chr08: 5994822-6002133 Sorghum bicolor
Sobic.008G057500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 6001134-6002133 Sorghum bicolor
Sobic.008G057500 2.0kb upstream 2.0kb upstream 8312   true Chr08: 5992822-6001133 Sorghum bicolor
Sobic.008G057500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 5992822-5994821 Sorghum bicolor
Sobic.008G057500 2.0kb downstream 2.0kb downstream 8312   true Chr08: 5994822-6003133 Sorghum bicolor
Sobic.008G057500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 6001134-6003133 Sorghum bicolor
Sobic.008G057500 5.0kb upstream 5.0kb upstream 11312   true Chr08: 5989822-6001133 Sorghum bicolor
Sobic.008G057500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 5989822-5994821 Sorghum bicolor
Sobic.008G057500 5.0kb downstream 5.0kb downstream 11312   true Chr08: 5994822-6006133 Sorghum bicolor
Sobic.008G057500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 6001134-6006133 Sorghum bicolor
Sobic.008G057500 10.0kb upstream 10.0kb upstream 16312   true Chr08: 5984822-6001133 Sorghum bicolor
Sobic.008G057500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 5984822-5994821 Sorghum bicolor
Sobic.008G057500 10.0kb downstream 10.0kb downstream 16312   true Chr08: 5994822-6011133 Sorghum bicolor
Sobic.008G057500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 6001134-6011133 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175771 5267 Panicoideae View MSA
124578019 5269 Grass View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.052     Low  
cufflinks 0.363        
cufflinks 0.291        
cufflinks 0.328        
cufflinks 0.05     Low  
cufflinks 5.51       High
cufflinks 0.801        
cufflinks 0.431        
cufflinks 0.314        
cufflinks 0.29        
cufflinks 0.017     Low Low
cufflinks 0.007     Low Low
cufflinks 0.336        
cufflinks 0.006     Low Low
cufflinks 4.633       High
cufflinks 0.358        
cufflinks 0.845        
cufflinks 0.844        
cufflinks 0.967        
cufflinks 0.779        
cufflinks 0.507        
cufflinks 0.022     Low  
cufflinks 0.014     Low Low
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.013     Low Low
cufflinks 0.032     Low  
cufflinks 1.436       High
cufflinks 0.571        

0 Strain