PhytoMine: Gene 29912.t000264 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
29912.t000264 0.5kb upstream	0.5kb	upstream	3417	true	29912: 1670973-1674389	Ricinus communis
29912.t000264 0.5kb upstream	0.5kb	upstream	500	false	29912: 1673890-1674389	Ricinus communis
29912.t000264 0.5kb downstream	0.5kb	downstream	3417	true	29912: 1670473-1673889	Ricinus communis
29912.t000264 0.5kb downstream	0.5kb	downstream	500	false	29912: 1670473-1670972	Ricinus communis
29912.t000264 1.0kb upstream	1.0kb	upstream	3917	true	29912: 1670973-1674889	Ricinus communis
29912.t000264 1.0kb upstream	1.0kb	upstream	1000	false	29912: 1673890-1674889	Ricinus communis
29912.t000264 1.0kb downstream	1.0kb	downstream	3917	true	29912: 1669973-1673889	Ricinus communis
29912.t000264 1.0kb downstream	1.0kb	downstream	1000	false	29912: 1669973-1670972	Ricinus communis
29912.t000264 2.0kb upstream	2.0kb	upstream	4917	true	29912: 1670973-1675889	Ricinus communis
29912.t000264 2.0kb upstream	2.0kb	upstream	2000	false	29912: 1673890-1675889	Ricinus communis
29912.t000264 2.0kb downstream	2.0kb	downstream	4917	true	29912: 1668973-1673889	Ricinus communis
29912.t000264 2.0kb downstream	2.0kb	downstream	2000	false	29912: 1668973-1670972	Ricinus communis
29912.t000264 5.0kb upstream	5.0kb	upstream	7917	true	29912: 1670973-1678889	Ricinus communis
29912.t000264 5.0kb upstream	5.0kb	upstream	5000	false	29912: 1673890-1678889	Ricinus communis
29912.t000264 5.0kb downstream	5.0kb	downstream	7917	true	29912: 1665973-1673889	Ricinus communis
29912.t000264 5.0kb downstream	5.0kb	downstream	5000	false	29912: 1665973-1670972	Ricinus communis
29912.t000264 10.0kb upstream	10.0kb	upstream	12917	true	29912: 1670973-1683889	Ricinus communis
29912.t000264 10.0kb upstream	10.0kb	upstream	10000	false	29912: 1673890-1683889	Ricinus communis
29912.t000264 10.0kb downstream	10.0kb	downstream	12917	true	29912: 1660973-1673889	Ricinus communis
29912.t000264 10.0kb downstream	10.0kb	downstream	10000	false	29912: 1660973-1670972	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122427466	5262	Malpighiales	View MSA
124245866	5268	Malvidae	View MSA
124070426	5270	Rosid	View MSA
123753240	5271	Pentapetalae	View MSA
122795840	5272	Eudicot	View MSA
122049622	5273	Angiosperm	View MSA
121344376	5274	Embryophyte	View MSA
123424016	5275	Viridiplantae	View MSA

Defline:	(1 of 4) K07889 - Ras-related protein Rab-5C (RAB5C)	Genomic Order:	261
Name:	29912.t000264	Secondary Identifier:	PAC:16813413

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Message:	---- Current page: ---- /phytomine/report.do?id=8974439 ---- Current query: ---- <query name="" model="genomic" view="Protein.ontologyAnnotations.ontologyTerm.identifier Protein.ontologyAnnotations.ontologyTerm.ontology.name Protein.ontologyAnnotations.subject.primaryIdentifier" longDescription=""><join path="Protein.ontologyAnnotations.ontologyTerm" style="OUTER"/><join path="Protein.ontologyAnnotations.ontologyTerm.ontology" style="OUTER"/><join path="Protein.ontologyAnnotations.subject" style="OUTER"/><constraint path="Protein.id" op="=" value="816713191"/></query>

Gene : 29912.t000264 R. communis v0.1

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain