Gene : VIT_214s0036g00480 V. vinifera v2.1
Defline:  (1 of 1) PTHR11766:SF0 - TYROSINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  709
Name:  ? VIT_214s0036g00480 Secondary Identifier:  ? PAC:38021500
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera TRNA-CHARGING-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_214s0036g00480 0.5kb upstream 0.5kb upstream 1958 true chr14: 10219338-10221295 Vitis vinifera
VIT_214s0036g00480 0.5kb upstream 0.5kb upstream 500 false chr14: 10219338-10219837 Vitis vinifera
VIT_214s0036g00480 0.5kb downstream 0.5kb downstream 1958 true chr14: 10219838-10221795 Vitis vinifera
VIT_214s0036g00480 0.5kb downstream 0.5kb downstream 500 false chr14: 10221296-10221795 Vitis vinifera
VIT_214s0036g00480 1.0kb upstream 1.0kb upstream 2458 true chr14: 10218838-10221295 Vitis vinifera
VIT_214s0036g00480 1.0kb upstream 1.0kb upstream 1000 false chr14: 10218838-10219837 Vitis vinifera
VIT_214s0036g00480 1.0kb downstream 1.0kb downstream 2458 true chr14: 10219838-10222295 Vitis vinifera
VIT_214s0036g00480 1.0kb downstream 1.0kb downstream 1000 false chr14: 10221296-10222295 Vitis vinifera
VIT_214s0036g00480 2.0kb upstream 2.0kb upstream 3458 true chr14: 10217838-10221295 Vitis vinifera
VIT_214s0036g00480 2.0kb upstream 2.0kb upstream 2000 false chr14: 10217838-10219837 Vitis vinifera
VIT_214s0036g00480 2.0kb downstream 2.0kb downstream 3458 true chr14: 10219838-10223295 Vitis vinifera
VIT_214s0036g00480 2.0kb downstream 2.0kb downstream 2000 false chr14: 10221296-10223295 Vitis vinifera
VIT_214s0036g00480 5.0kb upstream 5.0kb upstream 6458 true chr14: 10214838-10221295 Vitis vinifera
VIT_214s0036g00480 5.0kb upstream 5.0kb upstream 5000 false chr14: 10214838-10219837 Vitis vinifera
VIT_214s0036g00480 5.0kb downstream 5.0kb downstream 6458 true chr14: 10219838-10226295 Vitis vinifera
VIT_214s0036g00480 5.0kb downstream 5.0kb downstream 5000 false chr14: 10221296-10226295 Vitis vinifera
VIT_214s0036g00480 10.0kb upstream 10.0kb upstream 11458 true chr14: 10209838-10221295 Vitis vinifera
VIT_214s0036g00480 10.0kb upstream 10.0kb upstream 10000 false chr14: 10209838-10219837 Vitis vinifera
VIT_214s0036g00480 10.0kb downstream 10.0kb downstream 11458 true chr14: 10219838-10231295 Vitis vinifera
VIT_214s0036g00480 10.0kb downstream 10.0kb downstream 10000 false chr14: 10221296-10231295 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066531 5270 Rosid View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain