Gene : VIT_214s0030g00650 V. vinifera v2.1
Defline:  (1 of 2) PTHR21089//PTHR21089:SF12 - SHIKIMATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  437
Name:  ? VIT_214s0030g00650 Secondary Identifier:  ? PAC:38021975
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera ARO-PWY Vitis vinifera pathologic  
Vvinifera PWY-6163 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_214s0030g00650 0.5kb upstream 0.5kb upstream 8912 true chr14: 4786616-4795527 Vitis vinifera
VIT_214s0030g00650 0.5kb upstream 0.5kb upstream 500 false chr14: 4795028-4795527 Vitis vinifera
VIT_214s0030g00650 0.5kb downstream 0.5kb downstream 8912 true chr14: 4786116-4795027 Vitis vinifera
VIT_214s0030g00650 0.5kb downstream 0.5kb downstream 500 false chr14: 4786116-4786615 Vitis vinifera
VIT_214s0030g00650 1.0kb upstream 1.0kb upstream 9412 true chr14: 4786616-4796027 Vitis vinifera
VIT_214s0030g00650 1.0kb upstream 1.0kb upstream 1000 false chr14: 4795028-4796027 Vitis vinifera
VIT_214s0030g00650 1.0kb downstream 1.0kb downstream 9412 true chr14: 4785616-4795027 Vitis vinifera
VIT_214s0030g00650 1.0kb downstream 1.0kb downstream 1000 false chr14: 4785616-4786615 Vitis vinifera
VIT_214s0030g00650 2.0kb upstream 2.0kb upstream 10412 true chr14: 4786616-4797027 Vitis vinifera
VIT_214s0030g00650 2.0kb upstream 2.0kb upstream 2000 false chr14: 4795028-4797027 Vitis vinifera
VIT_214s0030g00650 2.0kb downstream 2.0kb downstream 10412 true chr14: 4784616-4795027 Vitis vinifera
VIT_214s0030g00650 2.0kb downstream 2.0kb downstream 2000 false chr14: 4784616-4786615 Vitis vinifera
VIT_214s0030g00650 5.0kb upstream 5.0kb upstream 13412 true chr14: 4786616-4800027 Vitis vinifera
VIT_214s0030g00650 5.0kb upstream 5.0kb upstream 5000 false chr14: 4795028-4800027 Vitis vinifera
VIT_214s0030g00650 5.0kb downstream 5.0kb downstream 13412 true chr14: 4781616-4795027 Vitis vinifera
VIT_214s0030g00650 5.0kb downstream 5.0kb downstream 5000 false chr14: 4781616-4786615 Vitis vinifera
VIT_214s0030g00650 10.0kb upstream 10.0kb upstream 18412 true chr14: 4786616-4805027 Vitis vinifera
VIT_214s0030g00650 10.0kb upstream 10.0kb upstream 10000 false chr14: 4795028-4805027 Vitis vinifera
VIT_214s0030g00650 10.0kb downstream 10.0kb downstream 18412 true chr14: 4776616-4795027 Vitis vinifera
VIT_214s0030g00650 10.0kb downstream 10.0kb downstream 10000 false chr14: 4776616-4786615 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071132 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain