Gene : 30055.t000061 R. communis v0.1
Defline:  (1 of 1) K14593 - capsanthin/capsorubin synthase (CCS1) Genomic Order:  61
Name:  ? 30055.t000061 Secondary Identifier:  ? PAC:16816222
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-6809 Ricinus communis pathologic  
Rcommunis PWY-695 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30055.t000061 0.5kb upstream 0.5kb upstream 1988 true 30055: 334251-336238 Ricinus communis
30055.t000061 0.5kb upstream 0.5kb upstream 500 false 30055: 334251-334750 Ricinus communis
30055.t000061 0.5kb downstream 0.5kb downstream 1988 true 30055: 334751-336738 Ricinus communis
30055.t000061 0.5kb downstream 0.5kb downstream 500 false 30055: 336239-336738 Ricinus communis
30055.t000061 1.0kb upstream 1.0kb upstream 2488 true 30055: 333751-336238 Ricinus communis
30055.t000061 1.0kb upstream 1.0kb upstream 1000 false 30055: 333751-334750 Ricinus communis
30055.t000061 1.0kb downstream 1.0kb downstream 2488 true 30055: 334751-337238 Ricinus communis
30055.t000061 1.0kb downstream 1.0kb downstream 1000 false 30055: 336239-337238 Ricinus communis
30055.t000061 2.0kb upstream 2.0kb upstream 3488 true 30055: 332751-336238 Ricinus communis
30055.t000061 2.0kb upstream 2.0kb upstream 2000 false 30055: 332751-334750 Ricinus communis
30055.t000061 2.0kb downstream 2.0kb downstream 3488 true 30055: 334751-338238 Ricinus communis
30055.t000061 2.0kb downstream 2.0kb downstream 2000 false 30055: 336239-338238 Ricinus communis
30055.t000061 5.0kb upstream 5.0kb upstream 6488 true 30055: 329751-336238 Ricinus communis
30055.t000061 5.0kb upstream 5.0kb upstream 5000 false 30055: 329751-334750 Ricinus communis
30055.t000061 5.0kb downstream 5.0kb downstream 6488 true 30055: 334751-341238 Ricinus communis
30055.t000061 5.0kb downstream 5.0kb downstream 5000 false 30055: 336239-341238 Ricinus communis
30055.t000061 10.0kb upstream 10.0kb upstream 11488 true 30055: 324751-336238 Ricinus communis
30055.t000061 10.0kb upstream 10.0kb upstream 10000 false 30055: 324751-334750 Ricinus communis
30055.t000061 10.0kb downstream 10.0kb downstream 11488 true 30055: 334751-346238 Ricinus communis
30055.t000061 10.0kb downstream 10.0kb downstream 10000 false 30055: 336239-346238 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448019 5262 Malpighiales View MSA
124246200 5268 Malvidae View MSA
124070716 5270 Rosid View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain