Protein : VIT_208s0040g01560.1 V. vinifera v2.1

UniProt Accession:  ? A0A438H6L0 Secondary Identifier:  PAC:38024915
Organism Name:  Vitis vinifera Length:  567  
Name:  VIT_208s0040g01560.1
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Proteins

9 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR014284 Domain RNA polymerase sigma-70 like domain
IPR013324 Domain RNA polymerase sigma factor, region 3/4
IPR013325 Domain RNA polymerase sigma factor, region 2
IPR007627 Domain RNA polymerase sigma-70 region 2
IPR007630 Domain RNA polymerase sigma-70 region 4
IPR000943 Domain RNA polymerase sigma-70
IPR007624 Domain RNA polymerase sigma-70 region 3
IPR016262 Family RNA polymerase sigma factor, SigB/C/D/F, plastid
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
VIT_208s0040g01560.1_CDS 1704   chr8: 12688436-12693557 Vitis vinifera

27 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0006352 GO VIT_208s0040g01560.1
GO:0006355 GO VIT_208s0040g01560.1
GO:0016987 GO VIT_208s0040g01560.1
IPR000943 InterPro VIT_208s0040g01560.1
IPR007624 InterPro VIT_208s0040g01560.1
IPR007627 InterPro VIT_208s0040g01560.1
IPR007630 InterPro VIT_208s0040g01560.1
IPR011991 InterPro VIT_208s0040g01560.1
G3DSA:1.10.10.10 GENE3D VIT_208s0040g01560.1
G3DSA:1.10.601.10 GENE3D VIT_208s0040g01560.1
GO:0003677 GO VIT_208s0040g01560.1
GO:0003700 GO VIT_208s0040g01560.1
PF04545 PFAM VIT_208s0040g01560.1
PIRSF000767 PIRSF VIT_208s0040g01560.1
PR00046 PRINTS VIT_208s0040g01560.1
SSF88659 SSF VIT_208s0040g01560.1
SSF88946 SSF VIT_208s0040g01560.1
TIGR02937 TIGRFAMs VIT_208s0040g01560.1
A0A438H6L0 UniProt VIT_208s0040g01560.1
IPR013324 InterPro VIT_208s0040g01560.1
IPR013325 InterPro VIT_208s0040g01560.1
IPR014284 InterPro VIT_208s0040g01560.1
IPR016262 InterPro VIT_208s0040g01560.1
PTHR30603 PANTHER VIT_208s0040g01560.1
PTHR30603:SF9 PANTHER VIT_208s0040g01560.1
PF04539 PFAM VIT_208s0040g01560.1
PF04542 PFAM VIT_208s0040g01560.1

0 Pathway Components

0 Pathways