Gene : VIT_208s0007g00680 V. vinifera v2.1
Defline:  (1 of 4) PTHR11709:SF62 - LACCASE-2 Genomic Order:  851
Name:  ? VIT_208s0007g00680 Secondary Identifier:  ? PAC:38023536
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PWY-5466 Vitis vinifera pathologic  
Vvinifera PWY-6824 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_208s0007g00680 0.5kb upstream 0.5kb upstream 2742 true chr8: 14892317-14895058 Vitis vinifera
VIT_208s0007g00680 0.5kb upstream 0.5kb upstream 500 false chr8: 14894559-14895058 Vitis vinifera
VIT_208s0007g00680 0.5kb downstream 0.5kb downstream 2742 true chr8: 14891817-14894558 Vitis vinifera
VIT_208s0007g00680 0.5kb downstream 0.5kb downstream 500 false chr8: 14891817-14892316 Vitis vinifera
VIT_208s0007g00680 1.0kb upstream 1.0kb upstream 3242 true chr8: 14892317-14895558 Vitis vinifera
VIT_208s0007g00680 1.0kb upstream 1.0kb upstream 1000 false chr8: 14894559-14895558 Vitis vinifera
VIT_208s0007g00680 1.0kb downstream 1.0kb downstream 3242 true chr8: 14891317-14894558 Vitis vinifera
VIT_208s0007g00680 1.0kb downstream 1.0kb downstream 1000 false chr8: 14891317-14892316 Vitis vinifera
VIT_208s0007g00680 2.0kb upstream 2.0kb upstream 4242 true chr8: 14892317-14896558 Vitis vinifera
VIT_208s0007g00680 2.0kb upstream 2.0kb upstream 2000 false chr8: 14894559-14896558 Vitis vinifera
VIT_208s0007g00680 2.0kb downstream 2.0kb downstream 4242 true chr8: 14890317-14894558 Vitis vinifera
VIT_208s0007g00680 2.0kb downstream 2.0kb downstream 2000 false chr8: 14890317-14892316 Vitis vinifera
VIT_208s0007g00680 5.0kb upstream 5.0kb upstream 7242 true chr8: 14892317-14899558 Vitis vinifera
VIT_208s0007g00680 5.0kb upstream 5.0kb upstream 5000 false chr8: 14894559-14899558 Vitis vinifera
VIT_208s0007g00680 5.0kb downstream 5.0kb downstream 7242 true chr8: 14887317-14894558 Vitis vinifera
VIT_208s0007g00680 5.0kb downstream 5.0kb downstream 5000 false chr8: 14887317-14892316 Vitis vinifera
VIT_208s0007g00680 10.0kb upstream 10.0kb upstream 12242 true chr8: 14892317-14904558 Vitis vinifera
VIT_208s0007g00680 10.0kb upstream 10.0kb upstream 10000 false chr8: 14894559-14904558 Vitis vinifera
VIT_208s0007g00680 10.0kb downstream 10.0kb downstream 12242 true chr8: 14882317-14894558 Vitis vinifera
VIT_208s0007g00680 10.0kb downstream 10.0kb downstream 10000 false chr8: 14882317-14892316 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070693 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain