Gene : VIT_216s0039g00660 V. vinifera v2.1
Defline:  (1 of 1) K03086 - RNA polymerase primary sigma factor (SIG1, rpoD) Genomic Order:  32
Name:  ? VIT_216s0039g00660 Secondary Identifier:  ? PAC:38032925
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_216s0039g00660 0.5kb upstream 0.5kb upstream 3358 true chr16: 334026-337383 Vitis vinifera
VIT_216s0039g00660 0.5kb upstream 0.5kb upstream 500 false chr16: 334026-334525 Vitis vinifera
VIT_216s0039g00660 0.5kb downstream 0.5kb downstream 3358 true chr16: 334526-337883 Vitis vinifera
VIT_216s0039g00660 0.5kb downstream 0.5kb downstream 500 false chr16: 337384-337883 Vitis vinifera
VIT_216s0039g00660 1.0kb upstream 1.0kb upstream 3858 true chr16: 333526-337383 Vitis vinifera
VIT_216s0039g00660 1.0kb upstream 1.0kb upstream 1000 false chr16: 333526-334525 Vitis vinifera
VIT_216s0039g00660 1.0kb downstream 1.0kb downstream 3858 true chr16: 334526-338383 Vitis vinifera
VIT_216s0039g00660 1.0kb downstream 1.0kb downstream 1000 false chr16: 337384-338383 Vitis vinifera
VIT_216s0039g00660 2.0kb upstream 2.0kb upstream 4858 true chr16: 332526-337383 Vitis vinifera
VIT_216s0039g00660 2.0kb upstream 2.0kb upstream 2000 false chr16: 332526-334525 Vitis vinifera
VIT_216s0039g00660 2.0kb downstream 2.0kb downstream 4858 true chr16: 334526-339383 Vitis vinifera
VIT_216s0039g00660 2.0kb downstream 2.0kb downstream 2000 false chr16: 337384-339383 Vitis vinifera
VIT_216s0039g00660 5.0kb upstream 5.0kb upstream 7858 true chr16: 329526-337383 Vitis vinifera
VIT_216s0039g00660 5.0kb upstream 5.0kb upstream 5000 false chr16: 329526-334525 Vitis vinifera
VIT_216s0039g00660 5.0kb downstream 5.0kb downstream 7858 true chr16: 334526-342383 Vitis vinifera
VIT_216s0039g00660 5.0kb downstream 5.0kb downstream 5000 false chr16: 337384-342383 Vitis vinifera
VIT_216s0039g00660 10.0kb upstream 10.0kb upstream 12858 true chr16: 324526-337383 Vitis vinifera
VIT_216s0039g00660 10.0kb upstream 10.0kb upstream 10000 false chr16: 324526-334525 Vitis vinifera
VIT_216s0039g00660 10.0kb downstream 10.0kb downstream 12858 true chr16: 334526-347383 Vitis vinifera
VIT_216s0039g00660 10.0kb downstream 10.0kb downstream 10000 false chr16: 337384-347383 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062387 5270 Rosid View MSA
123751324 5271 Pentapetalae View MSA
122790966 5272 Eudicot View MSA
122043866 5273 Angiosperm View MSA
121344219 5274 Embryophyte View MSA
123380005 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain