Gene : VIT_206s0004g00820 V. vinifera v2.1
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  87
Name:  ? VIT_206s0004g00820 Secondary Identifier:  ? PAC:38062168
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CAROTENOID-PWY Vitis vinifera pathologic  
Vvinifera PWY-6475 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_206s0004g00820 0.5kb upstream 0.5kb upstream 5686 true chr6: 935000-940685 Vitis vinifera
VIT_206s0004g00820 0.5kb upstream 0.5kb upstream 500 false chr6: 935000-935499 Vitis vinifera
VIT_206s0004g00820 0.5kb downstream 0.5kb downstream 5686 true chr6: 935500-941185 Vitis vinifera
VIT_206s0004g00820 0.5kb downstream 0.5kb downstream 500 false chr6: 940686-941185 Vitis vinifera
VIT_206s0004g00820 1.0kb upstream 1.0kb upstream 6186 true chr6: 934500-940685 Vitis vinifera
VIT_206s0004g00820 1.0kb upstream 1.0kb upstream 1000 false chr6: 934500-935499 Vitis vinifera
VIT_206s0004g00820 1.0kb downstream 1.0kb downstream 6186 true chr6: 935500-941685 Vitis vinifera
VIT_206s0004g00820 1.0kb downstream 1.0kb downstream 1000 false chr6: 940686-941685 Vitis vinifera
VIT_206s0004g00820 2.0kb upstream 2.0kb upstream 7186 true chr6: 933500-940685 Vitis vinifera
VIT_206s0004g00820 2.0kb upstream 2.0kb upstream 2000 false chr6: 933500-935499 Vitis vinifera
VIT_206s0004g00820 2.0kb downstream 2.0kb downstream 7186 true chr6: 935500-942685 Vitis vinifera
VIT_206s0004g00820 2.0kb downstream 2.0kb downstream 2000 false chr6: 940686-942685 Vitis vinifera
VIT_206s0004g00820 5.0kb upstream 5.0kb upstream 10186 true chr6: 930500-940685 Vitis vinifera
VIT_206s0004g00820 5.0kb upstream 5.0kb upstream 5000 false chr6: 930500-935499 Vitis vinifera
VIT_206s0004g00820 5.0kb downstream 5.0kb downstream 10186 true chr6: 935500-945685 Vitis vinifera
VIT_206s0004g00820 5.0kb downstream 5.0kb downstream 5000 false chr6: 940686-945685 Vitis vinifera
VIT_206s0004g00820 10.0kb upstream 10.0kb upstream 15186 true chr6: 925500-940685 Vitis vinifera
VIT_206s0004g00820 10.0kb upstream 10.0kb upstream 10000 false chr6: 925500-935499 Vitis vinifera
VIT_206s0004g00820 10.0kb downstream 10.0kb downstream 15186 true chr6: 935500-950685 Vitis vinifera
VIT_206s0004g00820 10.0kb downstream 10.0kb downstream 10000 false chr6: 940686-950685 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791897 5273 Angiosperm View MSA
124070779 5270 Rosid View MSA
123742301 5271 Pentapetalae View MSA
122795137 5272 Eudicot View MSA
121063168 5274 Embryophyte View MSA
123102943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain