Gene : VIT_211s0052g00820 V. vinifera v2.1
Defline:  (1 of 2) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Genomic Order:  1135
Name:  ? VIT_211s0052g00820 Secondary Identifier:  ? PAC:38064977
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera CALVIN-PWY Vitis vinifera pathologic  
Vvinifera PHOTOALL-PWY Vitis vinifera pathologic  
Vvinifera PWY-5723 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_211s0052g00820 0.5kb upstream 0.5kb upstream 1179 true chr11: 18374628-18375806 Vitis vinifera
VIT_211s0052g00820 0.5kb upstream 0.5kb upstream 500 false chr11: 18375307-18375806 Vitis vinifera
VIT_211s0052g00820 0.5kb downstream 0.5kb downstream 1179 true chr11: 18374128-18375306 Vitis vinifera
VIT_211s0052g00820 0.5kb downstream 0.5kb downstream 500 false chr11: 18374128-18374627 Vitis vinifera
VIT_211s0052g00820 1.0kb upstream 1.0kb upstream 1679 true chr11: 18374628-18376306 Vitis vinifera
VIT_211s0052g00820 1.0kb upstream 1.0kb upstream 1000 false chr11: 18375307-18376306 Vitis vinifera
VIT_211s0052g00820 1.0kb downstream 1.0kb downstream 1679 true chr11: 18373628-18375306 Vitis vinifera
VIT_211s0052g00820 1.0kb downstream 1.0kb downstream 1000 false chr11: 18373628-18374627 Vitis vinifera
VIT_211s0052g00820 2.0kb upstream 2.0kb upstream 2679 true chr11: 18374628-18377306 Vitis vinifera
VIT_211s0052g00820 2.0kb upstream 2.0kb upstream 2000 false chr11: 18375307-18377306 Vitis vinifera
VIT_211s0052g00820 2.0kb downstream 2.0kb downstream 2679 true chr11: 18372628-18375306 Vitis vinifera
VIT_211s0052g00820 2.0kb downstream 2.0kb downstream 2000 false chr11: 18372628-18374627 Vitis vinifera
VIT_211s0052g00820 5.0kb upstream 5.0kb upstream 5679 true chr11: 18374628-18380306 Vitis vinifera
VIT_211s0052g00820 5.0kb upstream 5.0kb upstream 5000 false chr11: 18375307-18380306 Vitis vinifera
VIT_211s0052g00820 5.0kb downstream 5.0kb downstream 5679 true chr11: 18369628-18375306 Vitis vinifera
VIT_211s0052g00820 5.0kb downstream 5.0kb downstream 5000 false chr11: 18369628-18374627 Vitis vinifera
VIT_211s0052g00820 10.0kb upstream 10.0kb upstream 10679 true chr11: 18374628-18385306 Vitis vinifera
VIT_211s0052g00820 10.0kb upstream 10.0kb upstream 10000 false chr11: 18375307-18385306 Vitis vinifera
VIT_211s0052g00820 10.0kb downstream 10.0kb downstream 10679 true chr11: 18364628-18375306 Vitis vinifera
VIT_211s0052g00820 10.0kb downstream 10.0kb downstream 10000 false chr11: 18364628-18374627 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070505 5270 Rosid View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain