Gene : VIT_211s0052g00600 V. vinifera v2.1
Defline:  (1 of 5) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  1112
Name:  ? VIT_211s0052g00600 Secondary Identifier:  ? PAC:38064651
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_211s0052g00600 0.5kb upstream 0.5kb upstream 2966 true chr11: 18043160-18046125 Vitis vinifera
VIT_211s0052g00600 0.5kb upstream 0.5kb upstream 500 false chr11: 18045626-18046125 Vitis vinifera
VIT_211s0052g00600 0.5kb downstream 0.5kb downstream 2966 true chr11: 18042660-18045625 Vitis vinifera
VIT_211s0052g00600 0.5kb downstream 0.5kb downstream 500 false chr11: 18042660-18043159 Vitis vinifera
VIT_211s0052g00600 1.0kb upstream 1.0kb upstream 3466 true chr11: 18043160-18046625 Vitis vinifera
VIT_211s0052g00600 1.0kb upstream 1.0kb upstream 1000 false chr11: 18045626-18046625 Vitis vinifera
VIT_211s0052g00600 1.0kb downstream 1.0kb downstream 3466 true chr11: 18042160-18045625 Vitis vinifera
VIT_211s0052g00600 1.0kb downstream 1.0kb downstream 1000 false chr11: 18042160-18043159 Vitis vinifera
VIT_211s0052g00600 2.0kb upstream 2.0kb upstream 4466 true chr11: 18043160-18047625 Vitis vinifera
VIT_211s0052g00600 2.0kb upstream 2.0kb upstream 2000 false chr11: 18045626-18047625 Vitis vinifera
VIT_211s0052g00600 2.0kb downstream 2.0kb downstream 4466 true chr11: 18041160-18045625 Vitis vinifera
VIT_211s0052g00600 2.0kb downstream 2.0kb downstream 2000 false chr11: 18041160-18043159 Vitis vinifera
VIT_211s0052g00600 5.0kb upstream 5.0kb upstream 7466 true chr11: 18043160-18050625 Vitis vinifera
VIT_211s0052g00600 5.0kb upstream 5.0kb upstream 5000 false chr11: 18045626-18050625 Vitis vinifera
VIT_211s0052g00600 5.0kb downstream 5.0kb downstream 7466 true chr11: 18038160-18045625 Vitis vinifera
VIT_211s0052g00600 5.0kb downstream 5.0kb downstream 5000 false chr11: 18038160-18043159 Vitis vinifera
VIT_211s0052g00600 10.0kb upstream 10.0kb upstream 12466 true chr11: 18043160-18055625 Vitis vinifera
VIT_211s0052g00600 10.0kb upstream 10.0kb upstream 10000 false chr11: 18045626-18055625 Vitis vinifera
VIT_211s0052g00600 10.0kb downstream 10.0kb downstream 12466 true chr11: 18033160-18045625 Vitis vinifera
VIT_211s0052g00600 10.0kb downstream 10.0kb downstream 10000 false chr11: 18033160-18043159 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065938 5270 Rosid View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain