Gene : VIT_205s0029g01200 V. vinifera v2.1
Defline:  (1 of 1) PTHR11946//PTHR11946:SF78//PTHR11946:SF86 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED // METHIONINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  1158
Name:  ? VIT_205s0029g01200 Secondary Identifier:  ? PAC:38072220
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera TRNA-CHARGING-PWY Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_205s0029g01200 0.5kb upstream 0.5kb upstream 29062 true chr5: 17059646-17088707 Vitis vinifera
VIT_205s0029g01200 0.5kb upstream 0.5kb upstream 500 false chr5: 17059646-17060145 Vitis vinifera
VIT_205s0029g01200 0.5kb downstream 0.5kb downstream 29062 true chr5: 17060146-17089207 Vitis vinifera
VIT_205s0029g01200 0.5kb downstream 0.5kb downstream 500 false chr5: 17088708-17089207 Vitis vinifera
VIT_205s0029g01200 1.0kb upstream 1.0kb upstream 29562 true chr5: 17059146-17088707 Vitis vinifera
VIT_205s0029g01200 1.0kb upstream 1.0kb upstream 1000 false chr5: 17059146-17060145 Vitis vinifera
VIT_205s0029g01200 1.0kb downstream 1.0kb downstream 29562 true chr5: 17060146-17089707 Vitis vinifera
VIT_205s0029g01200 1.0kb downstream 1.0kb downstream 1000 false chr5: 17088708-17089707 Vitis vinifera
VIT_205s0029g01200 2.0kb upstream 2.0kb upstream 30562 true chr5: 17058146-17088707 Vitis vinifera
VIT_205s0029g01200 2.0kb upstream 2.0kb upstream 2000 false chr5: 17058146-17060145 Vitis vinifera
VIT_205s0029g01200 2.0kb downstream 2.0kb downstream 30562 true chr5: 17060146-17090707 Vitis vinifera
VIT_205s0029g01200 2.0kb downstream 2.0kb downstream 2000 false chr5: 17088708-17090707 Vitis vinifera
VIT_205s0029g01200 5.0kb upstream 5.0kb upstream 33562 true chr5: 17055146-17088707 Vitis vinifera
VIT_205s0029g01200 5.0kb upstream 5.0kb upstream 5000 false chr5: 17055146-17060145 Vitis vinifera
VIT_205s0029g01200 5.0kb downstream 5.0kb downstream 33562 true chr5: 17060146-17093707 Vitis vinifera
VIT_205s0029g01200 5.0kb downstream 5.0kb downstream 5000 false chr5: 17088708-17093707 Vitis vinifera
VIT_205s0029g01200 10.0kb upstream 10.0kb upstream 38562 true chr5: 17050146-17088707 Vitis vinifera
VIT_205s0029g01200 10.0kb upstream 10.0kb upstream 10000 false chr5: 17050146-17060145 Vitis vinifera
VIT_205s0029g01200 10.0kb downstream 10.0kb downstream 38562 true chr5: 17060146-17098707 Vitis vinifera
VIT_205s0029g01200 10.0kb downstream 10.0kb downstream 10000 false chr5: 17088708-17098707 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain