Gene : VIT_200s0207g00090 V. vinifera v2.1
Defline:  (1 of 2) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  628
Name:  ? VIT_200s0207g00090 Secondary Identifier:  ? PAC:38050317
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vvinifera PWY-7511 Vitis vinifera pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
VIT_200s0207g00090 0.5kb upstream 0.5kb upstream 17416 true chrUn: 12418151-12435566 Vitis vinifera
VIT_200s0207g00090 0.5kb upstream 0.5kb upstream 500 false chrUn: 12418151-12418650 Vitis vinifera
VIT_200s0207g00090 0.5kb downstream 0.5kb downstream 17416 true chrUn: 12418651-12436066 Vitis vinifera
VIT_200s0207g00090 0.5kb downstream 0.5kb downstream 500 false chrUn: 12435567-12436066 Vitis vinifera
VIT_200s0207g00090 1.0kb upstream 1.0kb upstream 17916 true chrUn: 12417651-12435566 Vitis vinifera
VIT_200s0207g00090 1.0kb upstream 1.0kb upstream 1000 false chrUn: 12417651-12418650 Vitis vinifera
VIT_200s0207g00090 1.0kb downstream 1.0kb downstream 17916 true chrUn: 12418651-12436566 Vitis vinifera
VIT_200s0207g00090 1.0kb downstream 1.0kb downstream 1000 false chrUn: 12435567-12436566 Vitis vinifera
VIT_200s0207g00090 2.0kb upstream 2.0kb upstream 18916 true chrUn: 12416651-12435566 Vitis vinifera
VIT_200s0207g00090 2.0kb upstream 2.0kb upstream 2000 false chrUn: 12416651-12418650 Vitis vinifera
VIT_200s0207g00090 2.0kb downstream 2.0kb downstream 18916 true chrUn: 12418651-12437566 Vitis vinifera
VIT_200s0207g00090 2.0kb downstream 2.0kb downstream 2000 false chrUn: 12435567-12437566 Vitis vinifera
VIT_200s0207g00090 5.0kb upstream 5.0kb upstream 21916 true chrUn: 12413651-12435566 Vitis vinifera
VIT_200s0207g00090 5.0kb upstream 5.0kb upstream 5000 false chrUn: 12413651-12418650 Vitis vinifera
VIT_200s0207g00090 5.0kb downstream 5.0kb downstream 21916 true chrUn: 12418651-12440566 Vitis vinifera
VIT_200s0207g00090 5.0kb downstream 5.0kb downstream 5000 false chrUn: 12435567-12440566 Vitis vinifera
VIT_200s0207g00090 10.0kb upstream 10.0kb upstream 26916 true chrUn: 12408651-12435566 Vitis vinifera
VIT_200s0207g00090 10.0kb upstream 10.0kb upstream 10000 false chrUn: 12408651-12418650 Vitis vinifera
VIT_200s0207g00090 10.0kb downstream 10.0kb downstream 26916 true chrUn: 12418651-12445566 Vitis vinifera
VIT_200s0207g00090 10.0kb downstream 10.0kb downstream 10000 false chrUn: 12435567-12445566 Vitis vinifera

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain