Gene : 30225.t000009 R. communis v0.1
Defline:  (1 of 22) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  8
Name:  ? 30225.t000009 Secondary Identifier:  ? PAC:16824175
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
30225.t000009 0.5kb upstream 0.5kb upstream 767 true 30225: 293138-293904 Ricinus communis
30225.t000009 0.5kb upstream 0.5kb upstream 500 false 30225: 293405-293904 Ricinus communis
30225.t000009 0.5kb downstream 0.5kb downstream 767 true 30225: 292638-293404 Ricinus communis
30225.t000009 0.5kb downstream 0.5kb downstream 500 false 30225: 292638-293137 Ricinus communis
30225.t000009 1.0kb upstream 1.0kb upstream 1267 true 30225: 293138-294404 Ricinus communis
30225.t000009 1.0kb upstream 1.0kb upstream 1000 false 30225: 293405-294404 Ricinus communis
30225.t000009 1.0kb downstream 1.0kb downstream 1267 true 30225: 292138-293404 Ricinus communis
30225.t000009 1.0kb downstream 1.0kb downstream 1000 false 30225: 292138-293137 Ricinus communis
30225.t000009 2.0kb upstream 2.0kb upstream 2267 true 30225: 293138-295404 Ricinus communis
30225.t000009 2.0kb upstream 2.0kb upstream 2000 false 30225: 293405-295404 Ricinus communis
30225.t000009 2.0kb downstream 2.0kb downstream 2267 true 30225: 291138-293404 Ricinus communis
30225.t000009 2.0kb downstream 2.0kb downstream 2000 false 30225: 291138-293137 Ricinus communis
30225.t000009 5.0kb upstream 5.0kb upstream 5267 true 30225: 293138-298404 Ricinus communis
30225.t000009 5.0kb upstream 5.0kb upstream 5000 false 30225: 293405-298404 Ricinus communis
30225.t000009 5.0kb downstream 5.0kb downstream 5267 true 30225: 288138-293404 Ricinus communis
30225.t000009 5.0kb downstream 5.0kb downstream 5000 false 30225: 288138-293137 Ricinus communis
30225.t000009 10.0kb upstream 10.0kb upstream 10267 true 30225: 293138-303404 Ricinus communis
30225.t000009 10.0kb upstream 10.0kb upstream 10000 false 30225: 293405-303404 Ricinus communis
30225.t000009 10.0kb downstream 10.0kb downstream 10267 true 30225: 283138-293404 Ricinus communis
30225.t000009 10.0kb downstream 10.0kb downstream 10000 false 30225: 283138-293137 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449160 5262 Malpighiales View MSA
124236157 5268 Malvidae View MSA
124039256 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain