PhytoMine: Gene 38399.t000001 R. communis v0.1

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
38399.t000001 0.5kb upstream	0.5kb	upstream	3550	true	38399: 1-3550	Ricinus communis
38399.t000001 0.5kb upstream	0.5kb	upstream	235	false	38399: 1-235	Ricinus communis
38399.t000001 0.5kb downstream	0.5kb	downstream	3815	true	38399: 236-4050	Ricinus communis
38399.t000001 0.5kb downstream	0.5kb	downstream	500	false	38399: 3551-4050	Ricinus communis
38399.t000001 1.0kb upstream	1.0kb	upstream	3550	true	38399: 1-3550	Ricinus communis
38399.t000001 1.0kb upstream	1.0kb	upstream	235	false	38399: 1-235	Ricinus communis
38399.t000001 1.0kb downstream	1.0kb	downstream	4099	true	38399: 236-4334	Ricinus communis
38399.t000001 1.0kb downstream	1.0kb	downstream	784	false	38399: 3551-4334	Ricinus communis
38399.t000001 2.0kb upstream	2.0kb	upstream	3550	true	38399: 1-3550	Ricinus communis
38399.t000001 2.0kb upstream	2.0kb	upstream	235	false	38399: 1-235	Ricinus communis
38399.t000001 2.0kb downstream	2.0kb	downstream	4099	true	38399: 236-4334	Ricinus communis
38399.t000001 2.0kb downstream	2.0kb	downstream	784	false	38399: 3551-4334	Ricinus communis
38399.t000001 5.0kb upstream	5.0kb	upstream	3550	true	38399: 1-3550	Ricinus communis
38399.t000001 5.0kb upstream	5.0kb	upstream	235	false	38399: 1-235	Ricinus communis
38399.t000001 5.0kb downstream	5.0kb	downstream	4099	true	38399: 236-4334	Ricinus communis
38399.t000001 5.0kb downstream	5.0kb	downstream	784	false	38399: 3551-4334	Ricinus communis
38399.t000001 10.0kb upstream	10.0kb	upstream	3550	true	38399: 1-3550	Ricinus communis
38399.t000001 10.0kb upstream	10.0kb	upstream	235	false	38399: 1-235	Ricinus communis
38399.t000001 10.0kb downstream	10.0kb	downstream	4099	true	38399: 236-4334	Ricinus communis
38399.t000001 10.0kb downstream	10.0kb	downstream	784	false	38399: 3551-4334	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
121780468	5273	Angiosperm	View MSA
122449267	5262	Malpighiales	View MSA
124236187	5268	Malvidae	View MSA
123951624	5270	Rosid	View MSA
123746406	5271	Pentapetalae	View MSA
122771900	5272	Eudicot	View MSA
121052080	5274	Embryophyte	View MSA
123092140	5275	Viridiplantae	View MSA

Defline:	(1 of 2) K13342 - peroxin-5 (PEX5, PXR1)	Genomic Order:	1
Name:	38399.t000001	Secondary Identifier:	PAC:16827111

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Message:	---- Current page: ---- /phytomine/report.do?id=9201134 ---- Current query: ---- <query name="" model="genomic" view="GeneFlankingRegion.gene.primaryIdentifier GeneFlankingRegion.gene.briefDescription GeneFlankingRegion.gene.organism.shortName GeneFlankingRegion.gene.symbol GeneFlankingRegion.gene.length GeneFlankingRegion.gene.chromosome.primaryIdentifier GeneFlankingRegion.gene.chromosomeLocation.start GeneFlankingRegion.gene.chromosomeLocation.end" longDescription=""><join path="GeneFlankingRegion.gene.organism" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosome" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosomeLocation" style="OUTER"/><constraint path="GeneFlankingRegion.id" op="=" value="2118046770"/></query>

Gene : 38399.t000001 R. communis v0.1

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain