PhytoMine: Gene 40360.t000003 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
40360.t000003 0.5kb upstream	0.5kb	upstream	1004	true	40360: 112-1115	Ricinus communis
40360.t000003 0.5kb upstream	0.5kb	upstream	500	false	40360: 112-611	Ricinus communis
40360.t000003 0.5kb downstream	0.5kb	downstream	516	true	40360: 612-1127	Ricinus communis
40360.t000003 0.5kb downstream	0.5kb	downstream	12	false	40360: 1116-1127	Ricinus communis
40360.t000003 1.0kb upstream	1.0kb	upstream	1115	true	40360: 1-1115	Ricinus communis
40360.t000003 1.0kb upstream	1.0kb	upstream	611	false	40360: 1-611	Ricinus communis
40360.t000003 1.0kb downstream	1.0kb	downstream	516	true	40360: 612-1127	Ricinus communis
40360.t000003 1.0kb downstream	1.0kb	downstream	12	false	40360: 1116-1127	Ricinus communis
40360.t000003 2.0kb upstream	2.0kb	upstream	1115	true	40360: 1-1115	Ricinus communis
40360.t000003 2.0kb upstream	2.0kb	upstream	611	false	40360: 1-611	Ricinus communis
40360.t000003 2.0kb downstream	2.0kb	downstream	516	true	40360: 612-1127	Ricinus communis
40360.t000003 2.0kb downstream	2.0kb	downstream	12	false	40360: 1116-1127	Ricinus communis
40360.t000003 5.0kb upstream	5.0kb	upstream	1115	true	40360: 1-1115	Ricinus communis
40360.t000003 5.0kb upstream	5.0kb	upstream	611	false	40360: 1-611	Ricinus communis
40360.t000003 5.0kb downstream	5.0kb	downstream	516	true	40360: 612-1127	Ricinus communis
40360.t000003 5.0kb downstream	5.0kb	downstream	12	false	40360: 1116-1127	Ricinus communis
40360.t000003 10.0kb upstream	10.0kb	upstream	1115	true	40360: 1-1115	Ricinus communis
40360.t000003 10.0kb upstream	10.0kb	upstream	611	false	40360: 1-611	Ricinus communis
40360.t000003 10.0kb downstream	10.0kb	downstream	516	true	40360: 612-1127	Ricinus communis
40360.t000003 10.0kb downstream	10.0kb	downstream	12	false	40360: 1116-1127	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
121578588	5273	Angiosperm	View MSA
122447778	5262	Malpighiales	View MSA
124235625	5268	Malvidae	View MSA
123951226	5270	Rosid	View MSA
123529342	5271	Pentapetalae	View MSA
122564331	5272	Eudicot	View MSA
120851074	5274	Embryophyte	View MSA
122892269	5275	Viridiplantae	View MSA

Defline:	(1 of 109) PF00072 - Response regulator receiver domain (Response_reg)	Genomic Order:	3
Name:	40360.t000003	Secondary Identifier:	PAC:16827305

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Message:	---- Current page: ---- /phytomine/report.do?id=9203848 ---- Current query: ---- <query name="" model="genomic" view="GeneFlankingRegion.gene.primaryIdentifier GeneFlankingRegion.gene.briefDescription GeneFlankingRegion.gene.organism.shortName GeneFlankingRegion.gene.symbol GeneFlankingRegion.gene.length GeneFlankingRegion.gene.chromosome.primaryIdentifier GeneFlankingRegion.gene.chromosomeLocation.start GeneFlankingRegion.gene.chromosomeLocation.end" longDescription=""><join path="GeneFlankingRegion.gene.organism" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosome" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosomeLocation" style="OUTER"/><constraint path="GeneFlankingRegion.id" op="=" value="2122513542"/></query>

Gene : 40360.t000003 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain