PhytoMine: Gene 29289.t000001 R. communis v0.1

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Sequence Feature Displayer

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20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
29289.t000001 0.5kb upstream	0.5kb	upstream	4281	true	29289: 5484-9764	Ricinus communis
29289.t000001 0.5kb upstream	0.5kb	upstream	500	false	29289: 5484-5983	Ricinus communis
29289.t000001 0.5kb downstream	0.5kb	downstream	4281	true	29289: 5984-10264	Ricinus communis
29289.t000001 0.5kb downstream	0.5kb	downstream	500	false	29289: 9765-10264	Ricinus communis
29289.t000001 1.0kb upstream	1.0kb	upstream	4781	true	29289: 4984-9764	Ricinus communis
29289.t000001 1.0kb upstream	1.0kb	upstream	1000	false	29289: 4984-5983	Ricinus communis
29289.t000001 1.0kb downstream	1.0kb	downstream	4781	true	29289: 5984-10764	Ricinus communis
29289.t000001 1.0kb downstream	1.0kb	downstream	1000	false	29289: 9765-10764	Ricinus communis
29289.t000001 2.0kb upstream	2.0kb	upstream	5781	true	29289: 3984-9764	Ricinus communis
29289.t000001 2.0kb upstream	2.0kb	upstream	2000	false	29289: 3984-5983	Ricinus communis
29289.t000001 2.0kb downstream	2.0kb	downstream	5781	true	29289: 5984-11764	Ricinus communis
29289.t000001 2.0kb downstream	2.0kb	downstream	2000	false	29289: 9765-11764	Ricinus communis
29289.t000001 5.0kb upstream	5.0kb	upstream	8781	true	29289: 984-9764	Ricinus communis
29289.t000001 5.0kb upstream	5.0kb	upstream	5000	false	29289: 984-5983	Ricinus communis
29289.t000001 5.0kb downstream	5.0kb	downstream	7518	true	29289: 5984-13501	Ricinus communis
29289.t000001 5.0kb downstream	5.0kb	downstream	3737	false	29289: 9765-13501	Ricinus communis
29289.t000001 10.0kb upstream	10.0kb	upstream	9764	true	29289: 1-9764	Ricinus communis
29289.t000001 10.0kb upstream	10.0kb	upstream	5983	false	29289: 1-5983	Ricinus communis
29289.t000001 10.0kb downstream	10.0kb	downstream	7518	true	29289: 5984-13501	Ricinus communis
29289.t000001 10.0kb downstream	10.0kb	downstream	3737	false	29289: 9765-13501	Ricinus communis

8 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
122452659	5262	Malpighiales	View MSA
124241607	5268	Malvidae	View MSA
124068126	5270	Rosid	View MSA
123738113	5271	Pentapetalae	View MSA
122791682	5272	Eudicot	View MSA
122045734	5273	Angiosperm	View MSA
121349049	5274	Embryophyte	View MSA
123426175	5275	Viridiplantae	View MSA

Defline:	(1 of 1) PTHR23323:SF24 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 11 HOMOLOG	Genomic Order:	1
Name:	29289.t000001	Secondary Identifier:	PAC:16802618

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Message:	---- Current page: ---- /phytomine/report.do?id=9287463 ---- Current query: ---- <query name="" model="genomic" view="CDS.gene.primaryIdentifier CDS.gene.briefDescription CDS.gene.organism.shortName CDS.gene.symbol CDS.gene.length CDS.gene.chromosome.primaryIdentifier CDS.gene.chromosomeLocation.start CDS.gene.chromosomeLocation.end" longDescription=""><join path="CDS.gene.organism" style="OUTER"/><join path="CDS.gene.chromosome" style="OUTER"/><join path="CDS.gene.chromosomeLocation" style="OUTER"/><constraint path="CDS.id" op="=" value="2233831"/></query>

Gene : 29289.t000001 R. communis v0.1

Phytozome Links

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Sequence Feature Displayer

Ontology Annotation Displayer

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Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

Other

0 Synonyms

20 Flanking Regions

8 Protein Familys

0 Rna Seq Expressions

0 Strain