Gene : 29681.t000056 R. communis v0.1
Defline:  (1 of 2) PTHR12183:SF16 - PROTEIN ABERRANT POLLEN DEVELOPMENT 1-RELATED Genomic Order:  54
Name:  ? 29681.t000056 Secondary Identifier:  ? PAC:16805637
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis PWY-7511 Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
29681.t000056 0.5kb upstream 0.5kb upstream 3181 true 29681: 274468-277648 Ricinus communis
29681.t000056 0.5kb upstream 0.5kb upstream 500 false 29681: 274468-274967 Ricinus communis
29681.t000056 0.5kb downstream 0.5kb downstream 3181 true 29681: 274968-278148 Ricinus communis
29681.t000056 0.5kb downstream 0.5kb downstream 500 false 29681: 277649-278148 Ricinus communis
29681.t000056 1.0kb upstream 1.0kb upstream 3681 true 29681: 273968-277648 Ricinus communis
29681.t000056 1.0kb upstream 1.0kb upstream 1000 false 29681: 273968-274967 Ricinus communis
29681.t000056 1.0kb downstream 1.0kb downstream 3681 true 29681: 274968-278648 Ricinus communis
29681.t000056 1.0kb downstream 1.0kb downstream 1000 false 29681: 277649-278648 Ricinus communis
29681.t000056 2.0kb upstream 2.0kb upstream 4681 true 29681: 272968-277648 Ricinus communis
29681.t000056 2.0kb upstream 2.0kb upstream 2000 false 29681: 272968-274967 Ricinus communis
29681.t000056 2.0kb downstream 2.0kb downstream 4681 true 29681: 274968-279648 Ricinus communis
29681.t000056 2.0kb downstream 2.0kb downstream 2000 false 29681: 277649-279648 Ricinus communis
29681.t000056 5.0kb upstream 5.0kb upstream 7681 true 29681: 269968-277648 Ricinus communis
29681.t000056 5.0kb upstream 5.0kb upstream 5000 false 29681: 269968-274967 Ricinus communis
29681.t000056 5.0kb downstream 5.0kb downstream 7681 true 29681: 274968-282648 Ricinus communis
29681.t000056 5.0kb downstream 5.0kb downstream 5000 false 29681: 277649-282648 Ricinus communis
29681.t000056 10.0kb upstream 10.0kb upstream 12681 true 29681: 264968-277648 Ricinus communis
29681.t000056 10.0kb upstream 10.0kb upstream 10000 false 29681: 264968-274967 Ricinus communis
29681.t000056 10.0kb downstream 10.0kb downstream 12681 true 29681: 274968-287648 Ricinus communis
29681.t000056 10.0kb downstream 10.0kb downstream 10000 false 29681: 277649-287648 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122792833 5272 Eudicot View MSA
122463021 5262 Malpighiales View MSA
124250832 5268 Malvidae View MSA
124070780 5270 Rosid View MSA
123741557 5271 Pentapetalae View MSA
122042274 5273 Angiosperm View MSA
121349312 5274 Embryophyte View MSA
123381271 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain