Gene : 27472.t000021 R. communis v0.1
Defline:  (1 of 1) PF00126//PF00144//PF03466 - Bacterial regulatory helix-turn-helix protein, lysR family (HTH_1) // Beta-lactamase (Beta-lactamase) // LysR substrate binding domain (LysR_substrate) Genomic Order:  21
Name:  ? 27472.t000021 Secondary Identifier:  ? PAC:16798463
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
27472.t000021 0.5kb upstream 0.5kb upstream 4210 true 27472: 31726-35935 Ricinus communis
27472.t000021 0.5kb upstream 0.5kb upstream 500 false 27472: 31726-32225 Ricinus communis
27472.t000021 0.5kb downstream 0.5kb downstream 4210 true 27472: 32226-36435 Ricinus communis
27472.t000021 0.5kb downstream 0.5kb downstream 500 false 27472: 35936-36435 Ricinus communis
27472.t000021 1.0kb upstream 1.0kb upstream 4710 true 27472: 31226-35935 Ricinus communis
27472.t000021 1.0kb upstream 1.0kb upstream 1000 false 27472: 31226-32225 Ricinus communis
27472.t000021 1.0kb downstream 1.0kb downstream 4710 true 27472: 32226-36935 Ricinus communis
27472.t000021 1.0kb downstream 1.0kb downstream 1000 false 27472: 35936-36935 Ricinus communis
27472.t000021 2.0kb upstream 2.0kb upstream 5710 true 27472: 30226-35935 Ricinus communis
27472.t000021 2.0kb upstream 2.0kb upstream 2000 false 27472: 30226-32225 Ricinus communis
27472.t000021 2.0kb downstream 2.0kb downstream 5286 true 27472: 32226-37511 Ricinus communis
27472.t000021 2.0kb downstream 2.0kb downstream 1576 false 27472: 35936-37511 Ricinus communis
27472.t000021 5.0kb upstream 5.0kb upstream 8710 true 27472: 27226-35935 Ricinus communis
27472.t000021 5.0kb upstream 5.0kb upstream 5000 false 27472: 27226-32225 Ricinus communis
27472.t000021 5.0kb downstream 5.0kb downstream 5286 true 27472: 32226-37511 Ricinus communis
27472.t000021 5.0kb downstream 5.0kb downstream 1576 false 27472: 35936-37511 Ricinus communis
27472.t000021 10.0kb upstream 10.0kb upstream 13710 true 27472: 22226-35935 Ricinus communis
27472.t000021 10.0kb upstream 10.0kb upstream 10000 false 27472: 22226-32225 Ricinus communis
27472.t000021 10.0kb downstream 10.0kb downstream 5286 true 27472: 32226-37511 Ricinus communis
27472.t000021 10.0kb downstream 10.0kb downstream 1576 false 27472: 35936-37511 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121568392 5273 Angiosperm Singleton cluster - no MSA
122435778 5262 Malpighiales Singleton cluster - no MSA
124224429 5268 Malvidae Singleton cluster - no MSA
123940681 5270 Rosid Singleton cluster - no MSA
123519122 5271 Pentapetalae Singleton cluster - no MSA
122554128 5272 Eudicot Singleton cluster - no MSA
120840894 5274 Embryophyte Singleton cluster - no MSA
122882137 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain