Gene : 28333.t000015 R. communis v0.1
Defline:  (1 of 1) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  15
Name:  ? 28333.t000015 Secondary Identifier:  ? PAC:16800683
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Rcommunis GLYSYN-PWY Ricinus communis pathologic  
Rcommunis PWY-2161 Ricinus communis pathologic  
Rcommunis PWY-3841 Ricinus communis pathologic  
Rcommunis SER-GLYSYN-PWY Ricinus communis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
28333.t000015 0.5kb upstream 0.5kb upstream 5212 true 28333: 88229-93440 Ricinus communis
28333.t000015 0.5kb upstream 0.5kb upstream 500 false 28333: 92941-93440 Ricinus communis
28333.t000015 0.5kb downstream 0.5kb downstream 5212 true 28333: 87729-92940 Ricinus communis
28333.t000015 0.5kb downstream 0.5kb downstream 500 false 28333: 87729-88228 Ricinus communis
28333.t000015 1.0kb upstream 1.0kb upstream 5712 true 28333: 88229-93940 Ricinus communis
28333.t000015 1.0kb upstream 1.0kb upstream 1000 false 28333: 92941-93940 Ricinus communis
28333.t000015 1.0kb downstream 1.0kb downstream 5712 true 28333: 87229-92940 Ricinus communis
28333.t000015 1.0kb downstream 1.0kb downstream 1000 false 28333: 87229-88228 Ricinus communis
28333.t000015 2.0kb upstream 2.0kb upstream 6712 true 28333: 88229-94940 Ricinus communis
28333.t000015 2.0kb upstream 2.0kb upstream 2000 false 28333: 92941-94940 Ricinus communis
28333.t000015 2.0kb downstream 2.0kb downstream 6712 true 28333: 86229-92940 Ricinus communis
28333.t000015 2.0kb downstream 2.0kb downstream 2000 false 28333: 86229-88228 Ricinus communis
28333.t000015 5.0kb upstream 5.0kb upstream 9712 true 28333: 88229-97940 Ricinus communis
28333.t000015 5.0kb upstream 5.0kb upstream 5000 false 28333: 92941-97940 Ricinus communis
28333.t000015 5.0kb downstream 5.0kb downstream 9712 true 28333: 83229-92940 Ricinus communis
28333.t000015 5.0kb downstream 5.0kb downstream 5000 false 28333: 83229-88228 Ricinus communis
28333.t000015 10.0kb upstream 10.0kb upstream 14712 true 28333: 88229-102940 Ricinus communis
28333.t000015 10.0kb upstream 10.0kb upstream 10000 false 28333: 92941-102940 Ricinus communis
28333.t000015 10.0kb downstream 10.0kb downstream 14712 true 28333: 78229-92940 Ricinus communis
28333.t000015 10.0kb downstream 10.0kb downstream 10000 false 28333: 78229-88228 Ricinus communis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451530 5262 Malpighiales View MSA
124238878 5268 Malvidae View MSA
124064979 5270 Rosid View MSA
123747223 5271 Pentapetalae View MSA
122789073 5272 Eudicot View MSA
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain