Gene : HORVU3Hr1G108530 H. vulgare r1
Defline:  (1 of 1) 5.5.1.19 - Lycopene beta-cyclase Genomic Order:  5269
Name:  ? HORVU3Hr1G108530 Secondary Identifier:  ? PAC:38400001
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare CAROTENOID-PWY Hordeum vulgare pathologic  
Hvulgare PWY-5943 Hordeum vulgare pathologic  
Hvulgare PWY-5947 Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G108530 0.5kb upstream 0.5kb upstream 3473 true chr3H: 675217872-675221344 Hordeum vulgare
HORVU3Hr1G108530 0.5kb upstream 0.5kb upstream 500 false chr3H: 675217872-675218371 Hordeum vulgare
HORVU3Hr1G108530 0.5kb downstream 0.5kb downstream 3473 true chr3H: 675218372-675221844 Hordeum vulgare
HORVU3Hr1G108530 0.5kb downstream 0.5kb downstream 500 false chr3H: 675221345-675221844 Hordeum vulgare
HORVU3Hr1G108530 1.0kb upstream 1.0kb upstream 3973 true chr3H: 675217372-675221344 Hordeum vulgare
HORVU3Hr1G108530 1.0kb upstream 1.0kb upstream 1000 false chr3H: 675217372-675218371 Hordeum vulgare
HORVU3Hr1G108530 1.0kb downstream 1.0kb downstream 3973 true chr3H: 675218372-675222344 Hordeum vulgare
HORVU3Hr1G108530 1.0kb downstream 1.0kb downstream 1000 false chr3H: 675221345-675222344 Hordeum vulgare
HORVU3Hr1G108530 2.0kb upstream 2.0kb upstream 4973 true chr3H: 675216372-675221344 Hordeum vulgare
HORVU3Hr1G108530 2.0kb upstream 2.0kb upstream 2000 false chr3H: 675216372-675218371 Hordeum vulgare
HORVU3Hr1G108530 2.0kb downstream 2.0kb downstream 4973 true chr3H: 675218372-675223344 Hordeum vulgare
HORVU3Hr1G108530 2.0kb downstream 2.0kb downstream 2000 false chr3H: 675221345-675223344 Hordeum vulgare
HORVU3Hr1G108530 5.0kb upstream 5.0kb upstream 7973 true chr3H: 675213372-675221344 Hordeum vulgare
HORVU3Hr1G108530 5.0kb upstream 5.0kb upstream 5000 false chr3H: 675213372-675218371 Hordeum vulgare
HORVU3Hr1G108530 5.0kb downstream 5.0kb downstream 7973 true chr3H: 675218372-675226344 Hordeum vulgare
HORVU3Hr1G108530 5.0kb downstream 5.0kb downstream 5000 false chr3H: 675221345-675226344 Hordeum vulgare
HORVU3Hr1G108530 10.0kb upstream 10.0kb upstream 12973 true chr3H: 675208372-675221344 Hordeum vulgare
HORVU3Hr1G108530 10.0kb upstream 10.0kb upstream 10000 false chr3H: 675208372-675218371 Hordeum vulgare
HORVU3Hr1G108530 10.0kb downstream 10.0kb downstream 12973 true chr3H: 675218372-675231344 Hordeum vulgare
HORVU3Hr1G108530 10.0kb downstream 10.0kb downstream 10000 false chr3H: 675221345-675231344 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570588 5269 Grass View MSA
122042056 5273 Angiosperm View MSA
121350076 5274 Embryophyte View MSA
123425500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain