Gene : HORVU3Hr1G013880 H. vulgare r1

Defline:  (1 of 2) PTHR23309:SF10 - PEROXISOMAL FATTY ACID BETA-OXIDATION MULTIFUNCTIONAL PROTEIN AIM1 Genomic Order:  661
Name:  ? HORVU3Hr1G013880 Secondary Identifier:  ? PAC:38391041

Sequence Feature Displayer

Ontology Annotation Displayer

12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare ILEUDEG-PWY Hordeum vulgare pathologic  
Hvulgare PWY-5136 Hordeum vulgare pathologic  
Hvulgare PWY-5137 Hordeum vulgare pathologic  
Hvulgare PWY-5138 Hordeum vulgare pathologic  
Hvulgare PWY-561 Hordeum vulgare pathologic  
Hvulgare PWY-6435 Hordeum vulgare pathologic  
Hvulgare PWY-6837 Hordeum vulgare pathologic  
Hvulgare PWY-7036 Hordeum vulgare pathologic  
Hvulgare PWY-735 Hordeum vulgare pathologic  
Hvulgare PWY-7606 Hordeum vulgare pathologic  
Hvulgare PWY-7726 Hordeum vulgare pathologic  
Hvulgare VALDEG-PWY Hordeum vulgare pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU3Hr1G013880 0.5kb upstream 0.5kb upstream 8964 true chr3H: 30927341-30936304 Hordeum vulgare
HORVU3Hr1G013880 0.5kb upstream 0.5kb upstream 500 false chr3H: 30935805-30936304 Hordeum vulgare
HORVU3Hr1G013880 0.5kb downstream 0.5kb downstream 8964 true chr3H: 30926841-30935804 Hordeum vulgare
HORVU3Hr1G013880 0.5kb downstream 0.5kb downstream 500 false chr3H: 30926841-30927340 Hordeum vulgare
HORVU3Hr1G013880 1.0kb upstream 1.0kb upstream 9464 true chr3H: 30927341-30936804 Hordeum vulgare
HORVU3Hr1G013880 1.0kb upstream 1.0kb upstream 1000 false chr3H: 30935805-30936804 Hordeum vulgare
HORVU3Hr1G013880 1.0kb downstream 1.0kb downstream 9464 true chr3H: 30926341-30935804 Hordeum vulgare
HORVU3Hr1G013880 1.0kb downstream 1.0kb downstream 1000 false chr3H: 30926341-30927340 Hordeum vulgare
HORVU3Hr1G013880 2.0kb upstream 2.0kb upstream 10464 true chr3H: 30927341-30937804 Hordeum vulgare
HORVU3Hr1G013880 2.0kb upstream 2.0kb upstream 2000 false chr3H: 30935805-30937804 Hordeum vulgare
HORVU3Hr1G013880 2.0kb downstream 2.0kb downstream 10464 true chr3H: 30925341-30935804 Hordeum vulgare
HORVU3Hr1G013880 2.0kb downstream 2.0kb downstream 2000 false chr3H: 30925341-30927340 Hordeum vulgare
HORVU3Hr1G013880 5.0kb upstream 5.0kb upstream 13464 true chr3H: 30927341-30940804 Hordeum vulgare
HORVU3Hr1G013880 5.0kb upstream 5.0kb upstream 5000 false chr3H: 30935805-30940804 Hordeum vulgare
HORVU3Hr1G013880 5.0kb downstream 5.0kb downstream 13464 true chr3H: 30922341-30935804 Hordeum vulgare
HORVU3Hr1G013880 5.0kb downstream 5.0kb downstream 5000 false chr3H: 30922341-30927340 Hordeum vulgare
HORVU3Hr1G013880 10.0kb upstream 10.0kb upstream 18464 true chr3H: 30927341-30945804 Hordeum vulgare
HORVU3Hr1G013880 10.0kb upstream 10.0kb upstream 10000 false chr3H: 30935805-30945804 Hordeum vulgare
HORVU3Hr1G013880 10.0kb downstream 10.0kb downstream 18464 true chr3H: 30917341-30935804 Hordeum vulgare
HORVU3Hr1G013880 10.0kb downstream 10.0kb downstream 10000 false chr3H: 30917341-30927340 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568788 5269 Grass View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain