Gene : HORVU5Hr1G005740 H. vulgare r1
Defline:  (1 of 3) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  211
Name:  ? HORVU5Hr1G005740 Secondary Identifier:  ? PAC:38430813
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Hvulgare CAROTENOID-PWY Hordeum vulgare pathologic  
Hvulgare PWY-6475 Hordeum vulgare pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
HORVU5Hr1G005740 0.5kb upstream 0.5kb upstream 3549 true chr5H: 9252025-9255573 Hordeum vulgare
HORVU5Hr1G005740 0.5kb upstream 0.5kb upstream 500 false chr5H: 9255074-9255573 Hordeum vulgare
HORVU5Hr1G005740 0.5kb downstream 0.5kb downstream 3549 true chr5H: 9251525-9255073 Hordeum vulgare
HORVU5Hr1G005740 0.5kb downstream 0.5kb downstream 500 false chr5H: 9251525-9252024 Hordeum vulgare
HORVU5Hr1G005740 1.0kb upstream 1.0kb upstream 4049 true chr5H: 9252025-9256073 Hordeum vulgare
HORVU5Hr1G005740 1.0kb upstream 1.0kb upstream 1000 false chr5H: 9255074-9256073 Hordeum vulgare
HORVU5Hr1G005740 1.0kb downstream 1.0kb downstream 4049 true chr5H: 9251025-9255073 Hordeum vulgare
HORVU5Hr1G005740 1.0kb downstream 1.0kb downstream 1000 false chr5H: 9251025-9252024 Hordeum vulgare
HORVU5Hr1G005740 2.0kb upstream 2.0kb upstream 5049 true chr5H: 9252025-9257073 Hordeum vulgare
HORVU5Hr1G005740 2.0kb upstream 2.0kb upstream 2000 false chr5H: 9255074-9257073 Hordeum vulgare
HORVU5Hr1G005740 2.0kb downstream 2.0kb downstream 5049 true chr5H: 9250025-9255073 Hordeum vulgare
HORVU5Hr1G005740 2.0kb downstream 2.0kb downstream 2000 false chr5H: 9250025-9252024 Hordeum vulgare
HORVU5Hr1G005740 5.0kb upstream 5.0kb upstream 8049 true chr5H: 9252025-9260073 Hordeum vulgare
HORVU5Hr1G005740 5.0kb upstream 5.0kb upstream 5000 false chr5H: 9255074-9260073 Hordeum vulgare
HORVU5Hr1G005740 5.0kb downstream 5.0kb downstream 8049 true chr5H: 9247025-9255073 Hordeum vulgare
HORVU5Hr1G005740 5.0kb downstream 5.0kb downstream 5000 false chr5H: 9247025-9252024 Hordeum vulgare
HORVU5Hr1G005740 10.0kb upstream 10.0kb upstream 13049 true chr5H: 9252025-9265073 Hordeum vulgare
HORVU5Hr1G005740 10.0kb upstream 10.0kb upstream 10000 false chr5H: 9255074-9265073 Hordeum vulgare
HORVU5Hr1G005740 10.0kb downstream 10.0kb downstream 13049 true chr5H: 9242025-9255073 Hordeum vulgare
HORVU5Hr1G005740 10.0kb downstream 10.0kb downstream 10000 false chr5H: 9242025-9252024 Hordeum vulgare

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
124573872 5269 Grass View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain