Gene : Migut.L01683 M. guttatus v2.0

Defline:  (1 of 1) KOG0107//KOG0123//KOG0144//KOG0145//KOG0146 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Polyadenylate-binding protein (RRM superfamily) // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // RNA-binding protein ELAV/HU (RRM superfamily) // RNA-binding protein ETR-3 (RRM superfamily) Genomic Order:  1683
Name:  ? Migut.L01683 Secondary Identifier:  ? PAC:28935915

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.L01683 0.5kb upstream 0.5kb upstream 2259   true scaffold_12: 24904127-24906385 Mimulus guttatus
Migut.L01683 0.5kb upstream 0.5kb upstream 500   false scaffold_12: 24905886-24906385 Mimulus guttatus
Migut.L01683 0.5kb downstream 0.5kb downstream 2259   true scaffold_12: 24903627-24905885 Mimulus guttatus
Migut.L01683 0.5kb downstream 0.5kb downstream 500   false scaffold_12: 24903627-24904126 Mimulus guttatus
Migut.L01683 1.0kb upstream 1.0kb upstream 2759   true scaffold_12: 24904127-24906885 Mimulus guttatus
Migut.L01683 1.0kb upstream 1.0kb upstream 1000   false scaffold_12: 24905886-24906885 Mimulus guttatus
Migut.L01683 1.0kb downstream 1.0kb downstream 2759   true scaffold_12: 24903127-24905885 Mimulus guttatus
Migut.L01683 1.0kb downstream 1.0kb downstream 1000   false scaffold_12: 24903127-24904126 Mimulus guttatus
Migut.L01683 2.0kb upstream 2.0kb upstream 3759   true scaffold_12: 24904127-24907885 Mimulus guttatus
Migut.L01683 2.0kb upstream 2.0kb upstream 2000   false scaffold_12: 24905886-24907885 Mimulus guttatus
Migut.L01683 2.0kb downstream 2.0kb downstream 3759   true scaffold_12: 24902127-24905885 Mimulus guttatus
Migut.L01683 2.0kb downstream 2.0kb downstream 2000   false scaffold_12: 24902127-24904126 Mimulus guttatus
Migut.L01683 5.0kb upstream 5.0kb upstream 6759   true scaffold_12: 24904127-24910885 Mimulus guttatus
Migut.L01683 5.0kb upstream 5.0kb upstream 5000   false scaffold_12: 24905886-24910885 Mimulus guttatus
Migut.L01683 5.0kb downstream 5.0kb downstream 6759   true scaffold_12: 24899127-24905885 Mimulus guttatus
Migut.L01683 5.0kb downstream 5.0kb downstream 5000   false scaffold_12: 24899127-24904126 Mimulus guttatus
Migut.L01683 10.0kb upstream 10.0kb upstream 11759   true scaffold_12: 24904127-24915885 Mimulus guttatus
Migut.L01683 10.0kb upstream 10.0kb upstream 10000   false scaffold_12: 24905886-24915885 Mimulus guttatus
Migut.L01683 10.0kb downstream 10.0kb downstream 11759   true scaffold_12: 24894127-24905885 Mimulus guttatus
Migut.L01683 10.0kb downstream 10.0kb downstream 10000   false scaffold_12: 24894127-24904126 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
121413070 5263 Asterids View MSA
123739756 5271 Pentapetalae View MSA
122769963 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain