Gene : Migut.A00787 M. guttatus v2.0

Defline:  (1 of 1) KOG0978//KOG4809 - E3 ubiquitin ligase involved in syntaxin degradation // Rab6 GTPase-interacting protein involved in endosome-to-TGN transport Genomic Order:  787
Name:  ? Migut.A00787 Secondary Identifier:  ? PAC:28939092

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.A00787 0.5kb upstream 0.5kb upstream 5604 true scaffold_1: 4518536-4524139 Mimulus guttatus
Migut.A00787 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4523640-4524139 Mimulus guttatus
Migut.A00787 0.5kb downstream 0.5kb downstream 5604 true scaffold_1: 4518036-4523639 Mimulus guttatus
Migut.A00787 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4518036-4518535 Mimulus guttatus
Migut.A00787 1.0kb upstream 1.0kb upstream 6104 true scaffold_1: 4518536-4524639 Mimulus guttatus
Migut.A00787 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4523640-4524639 Mimulus guttatus
Migut.A00787 1.0kb downstream 1.0kb downstream 6104 true scaffold_1: 4517536-4523639 Mimulus guttatus
Migut.A00787 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4517536-4518535 Mimulus guttatus
Migut.A00787 2.0kb upstream 2.0kb upstream 7104 true scaffold_1: 4518536-4525639 Mimulus guttatus
Migut.A00787 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4523640-4525639 Mimulus guttatus
Migut.A00787 2.0kb downstream 2.0kb downstream 7104 true scaffold_1: 4516536-4523639 Mimulus guttatus
Migut.A00787 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4516536-4518535 Mimulus guttatus
Migut.A00787 5.0kb upstream 5.0kb upstream 10104 true scaffold_1: 4518536-4528639 Mimulus guttatus
Migut.A00787 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4523640-4528639 Mimulus guttatus
Migut.A00787 5.0kb downstream 5.0kb downstream 10104 true scaffold_1: 4513536-4523639 Mimulus guttatus
Migut.A00787 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4513536-4518535 Mimulus guttatus
Migut.A00787 10.0kb upstream 10.0kb upstream 15104 true scaffold_1: 4518536-4533639 Mimulus guttatus
Migut.A00787 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4523640-4533639 Mimulus guttatus
Migut.A00787 10.0kb downstream 10.0kb downstream 15104 true scaffold_1: 4508536-4523639 Mimulus guttatus
Migut.A00787 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4508536-4518535 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
121473012 5263 Asterids View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain