Gene : Migut.C00552 M. guttatus v2.0
Defline:  (1 of 12) PF00124 - Photosynthetic reaction centre protein (Photo_RC) Genomic Order:  552
Name:  ? Migut.C00552 Secondary Identifier:  ? PAC:28944113
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mguttatus PHOTOALL-PWY Mimulus guttatus pathologic  
Mguttatus PWY-101 Mimulus guttatus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Migut.C00552 0.5kb upstream 0.5kb upstream 4154 true scaffold_3: 13480878-13485031 Mimulus guttatus
Migut.C00552 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 13484532-13485031 Mimulus guttatus
Migut.C00552 0.5kb downstream 0.5kb downstream 4154 true scaffold_3: 13480378-13484531 Mimulus guttatus
Migut.C00552 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 13480378-13480877 Mimulus guttatus
Migut.C00552 1.0kb upstream 1.0kb upstream 4654 true scaffold_3: 13480878-13485531 Mimulus guttatus
Migut.C00552 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 13484532-13485531 Mimulus guttatus
Migut.C00552 1.0kb downstream 1.0kb downstream 4654 true scaffold_3: 13479878-13484531 Mimulus guttatus
Migut.C00552 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 13479878-13480877 Mimulus guttatus
Migut.C00552 2.0kb upstream 2.0kb upstream 5654 true scaffold_3: 13480878-13486531 Mimulus guttatus
Migut.C00552 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 13484532-13486531 Mimulus guttatus
Migut.C00552 2.0kb downstream 2.0kb downstream 5654 true scaffold_3: 13478878-13484531 Mimulus guttatus
Migut.C00552 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 13478878-13480877 Mimulus guttatus
Migut.C00552 5.0kb upstream 5.0kb upstream 8654 true scaffold_3: 13480878-13489531 Mimulus guttatus
Migut.C00552 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 13484532-13489531 Mimulus guttatus
Migut.C00552 5.0kb downstream 5.0kb downstream 8654 true scaffold_3: 13475878-13484531 Mimulus guttatus
Migut.C00552 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 13475878-13480877 Mimulus guttatus
Migut.C00552 10.0kb upstream 10.0kb upstream 13654 true scaffold_3: 13480878-13494531 Mimulus guttatus
Migut.C00552 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 13484532-13494531 Mimulus guttatus
Migut.C00552 10.0kb downstream 10.0kb downstream 13654 true scaffold_3: 13470878-13484531 Mimulus guttatus
Migut.C00552 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 13470878-13480877 Mimulus guttatus

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468947 5263 Asterids View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain